Peer Review History
| Original SubmissionJuly 24, 2020 |
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PONE-D-20-22710 Emergency mortality of medical patients was predicted by qSOFA score PLOS ONE Dear Dr. Chen, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Oct 17 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Marleen Smits, PhD Academic Editor PLOS ONE Additional Editor Comments: Dear Dr. Chen, You have submitted a related manuscript to PLOS ONE entitled "Predictive value of qSOFA score for death in emergency department resuscitation room among adult trauma patients". We have considered the overlap between the two papers in light of the journal's policy. In your paper entitled “Emergency mortality of medical patients was predicted by qSOFA score” the predictive value of qSOFA for death in the ED was examined. The second paper “Predictive value of qSOFA score for death in emergency department resuscitation room among adult trauma patients” presents a subgroup analysis of trauma patients in the ED resuscitation room. These patients were also included in the study described in the first paper. Both analyses provide valuable information. However by splitting up the results into two separate papers, it seems that there are two studies that provide evidence for the predictive value of qSOFA, while in fact it is only one study. The study population of “Emergency mortality of medical patients was predicted by qSOFA score"" includes the study population of "Predictive value of qSOFA score for death in emergency department resuscitation room among adult trauma patients". Therefore, we suggest you combine the two papers into one paper. We look forward to receiving a major revision of “Emergency mortality of medical patients was predicted by qSOFA score", which includes the subgroup analysis of adult trauma patients in the ED resuscitation room. Kind regards, Marleen Smits Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please include your tables as part of your main manuscript and remove the individual files. Please note that supplementary tables (should remain/ be uploaded) as separate "supporting information" files. 3. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. [Note: HTML markup is below. Please do not edit.] [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-20-22710R1 Emergency mortality of internal medicine patients was predicted by qSOFA score PLOS ONE Dear Dr. Chen, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 11 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Marleen Smits, PhD Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #2: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No Reviewer #2: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: No ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The study design and methods appear adequate to answer the research question. However the rationale of the research question and conclusions drawn from the results are inadequate in my opinion. The qSOFA was designed to assess patients with possible sepsis to quickly identify those with increased risk of adverse outcome. In this study the qSOFA is evaluated as a prediction tool for ED mortality in all non-traumatic patients. It is not explained what the clinical use can be. It is good practice in EDs to triage all patients upon arrival. The most important factor determining the triage level is the chance of (ED)mortality. It is not explained if the qSOFA is proposed as a triage system, or that it adds to the existing triage system. Furthermore, the qSOFA score is not compared to the NEWS (or other EWS), as the authors deem these to inconvenient to measure in the ED. However, the respiratory rate is the vital sign that is most time consuming to measure, and NEWS only adds point for the heart rate, SpO2 and body temperature, measurements that can be easily obtained during triage. The conclusion that qSOFA has good performance is relative. Most patients with a high score survive (598/672 patients with qSOFA ≥2), and most non-survivors presented with a qSOFA <2 (154/228 patients). To assess whether this is a good performance, the results should be compared to NEWS and/or triage categories. Lastly, the (revised) title is not clear: the term “emergency mortality” should best be avoided and “internal medicine patients” usually do not include patients presented with cardiac complaints. “Non-trauma patients” appears to be a better representation of the study population. Reviewer #2: Chen et al. analyse the association between qSOFA score and early mortality in the emergency department in a large cohort of “internal medicine” patients. I have some suggestions: - English form is poor and needs revising by a native-english speaker. - Abstract, Discussion: authors claim that their study is adequate “in predicting the emergency department (ED) mortality”. However, this is a retrospective cohort study, and authors can only observe an association between variables. In order to observe a prediction, a prospective or – better – a randomized study will be required. - Abstract, Materials and Methods: “internal medicine patients” – please clarify: were these patients the ones admitted to an internal medicine department ? Or this term is adopted to identify generically “medical patients” ? Since authors adopt “ED mortality” as main outcome, I think that authors mean for “internal medicine patients” the ones with medical conditions, however this concept is ambiguous and not clear. Moreover, the analysed cohort is not well characterised, which is a major limitation for the interpretation of the results. Authors must define in the results which medical pathologies were considered (acute myocardial infarction ? sepsis ? septic shock ? acute heart failure ? atrial fibrillation ? pneumonia ? etc.) and which was the prevalence of outcome in each subgroup. - Materials and Methods, Results: in particular, how many patients affected by infective diagnoses were included in the cohort ? how many with sepsis or septic shock ? was the outcome different in patients admitted for "infective" pathologies and "non-infective" pathologies ? - Materials and Methods: the exclusion of ischemic stroke is a bias, in my opinion, since it is an acute medical condition burdened by a high mortality. However authors specified this as a limitation of the study. Were other neurologic conditions (status epilepticus, brain haemorrage, and so on) considered in this cohort ? - Materials and Methods: another point is the absence of comorbidities: authors should at least consider the most common comorbidities in their analyses (COPD, chronic heart failure, cancer, atrial fibrillation, ischemic heart disease, etc.) since several studies associated the complexity of the patient to an increased risk of in-hospital death. This could radically modify the estimates performed in the logistic regression analysis. - Materials and Methods: a Cox regression analysis considering the time-to-event (time-to-ED death) could considered instead of logistic regression analysis. - Materials and Methods, Results: authors did not consider patients died after hospitalization from ED. I think, however, that they could present the datum of how many patients were admitted to an ICU, which could be a surrogate of their critical illness, as already done in other similar studies. - Results, Materials and Methods, Discussion: this study is similar other published papers (for example: https://emj.bmj.com/content/35/6/350), in which qSOFA was observed to perform better than other scores in predicting ED mortality and critical illness. Authors should discuss on what is similar and what is different from what is already known and published. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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PONE-D-20-22710R2 Emergency mortality of non-trauma patients was predicted by the qSOFA score PLOS ONE Dear Dr. Chen, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== Please address the comment of reviewer 1 that the MEWS gives a better prediction, which should lead to an adjustment of the conclusions of the manuscript. Moreover, please have a native English speaker check the language in the paper. ============================== Please submit your revised manuscript by Mar 14 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Marleen Smits, PhD Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No Reviewer #2: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: No ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I acknowledge the additional analysis of the MEWS by the authors. However, in accordance with other research, the MEWS gives a better prediction, which is in my opinion reason to adjust the conclusions of the manuscript. The AUROC is not the most indicative measure to assess the added value. The sens, spec, PPV and NPV at the cutoff point used in clinical practice are more important. For qSOFA a score of 2 or higher is used to identify high risk patients. At this cutoff point sensitivity is 32% and specificity 96%. According to the ROC curve, at the optimal cutoff point of MEWS sens is about 50% with spec of 97-98%. This is a major difference, not shown in the relatively small difference in AUROC. The arguments that MEWS is to complicated to use in the ED and scores are often miscalculated are not valid when the score are automatically calculated which is becoming more and more standard practice. The manuscript school be revised, either more in support of the use of MEWS/NEWS (early warning scoring systems can vary substantially and may also be compared), or as a validation of the prediction of mortality of qSOFA (without concluding it should be used in triage). Reviewer #2: I have read the authors' responses and the reviewed article. Authors answered to most of the questions and the overall quality of the paper improved after revision. However, English form is still not fair for publication in an international journal. I recommend to deeply revise the English form (best if the revision is done by a native-English-speaker) in all the sections of the paper. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 3 |
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Emergency mortality of non-trauma patients was predicted by the qSOFA score PONE-D-20-22710R3 Dear Dr. Chen, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Marleen Smits, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-20-22710R3 Emergency mortality of non-trauma patients was predicted by qSOFA score Dear Dr. Chen: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Marleen Smits Academic Editor PLOS ONE |
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