Peer Review History
| Original SubmissionMay 31, 2020 |
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PONE-D-20-16460 Trends in breast cancer incidence in Ho Chi Minh City 1996 - 2015: a registry-based study PLOS ONE Dear Dr. Ho-Pham, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Oct 17 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Chunyan He, ScD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. In the ethics statement in the manuscript and in the online submission form, please provide additional information about the patient records used in your retrospective study. Specifically, please ensure that you have discussed whether all data were fully anonymized before you accessed them and/or whether the IRB or ethics committee waived the requirement for informed consent. If patients provided informed written consent to have data from their medical records used in research, please include this information. 3. For studies involving humans categorized by race/ethnicity authors should update outmoded terms and potentially stigmatizing labels to more current, acceptable terminology. Specifically, “Caucasian” should be changed to “white” or “of [Western] European descent” (as appropriate). 4. To comply with PLOS ONE submission guidelines, in your Methods section, please provide additional information regarding your statistical analyses. For more information on PLOS ONE's expectations for statistical reporting, please see https://journals.plos.org/plosone/s/submission-guidelines.#loc-statistical-reporting. 5.In your Data Availability statement, you have not specified where the minimal data set underlying the results described in your manuscript can be found. PLOS defines a study's minimal data set as the underlying data used to reach the conclusions drawn in the manuscript and any additional data required to replicate the reported study findings in their entirety. All PLOS journals require that the minimal data set be made fully available. For more information about our data policy, please see http://journals.plos.org/plosone/s/data-availability. Upon re-submitting your revised manuscript, please upload your study’s minimal underlying data set as either Supporting Information files or to a stable, public repository and include the relevant URLs, DOIs, or accession numbers within your revised cover letter. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. Any potentially identifying patient information must be fully anonymized. Important: If there are ethical or legal restrictions to sharing your data publicly, please explain these restrictions in detail. Please see our guidelines for more information on what we consider unacceptable restrictions to publicly sharing data: http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. Note that it is not acceptable for the authors to be the sole named individuals responsible for ensuring data access. We will update your Data Availability statement to reflect the information you provide in your cover letter. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No Reviewer #2: Yes Reviewer #3: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: Yes Reviewer #3: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: Yes Reviewer #3: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The research was only a descriptive analysis of the number of newly discovered breast cancer patients, not a cohort study as described in the method. Data was not analysed nor discussed in any depths other than age standardized and age specific. More should be done in depth of lag time, time of diagnosis, diagnosis reason and age of diagnosis from these supposedly complete data from that long period of time that can yield so much more than a simple analysis like this. Plus, the screening strategy over that long period of time should be explained in details to rule out any bias and confoundings in the finding of increasing/decreasing incidence rate. Reviewer #2: The author need to include the approved decision from Ethics Committee. The author need to explain more how they do the standardized estimation (result in table 3) especially total of those who come for screening for cancel was not showed. Some text error recorded e.g (end of page 5, table 3 - unadjusted and some where else) Reviewer #3: Comments for article “Trends in breast cancer incidence in Ho Chi Minh City 1996 - 2015: a registry-based study” This article deals with the evolution of breast cancer incidence in Ho Chi Minh City of Vietnam country between 1996 to 2015. This is an important issue, since such analyses enable a measurement of the burden for the health system, to make choices for health policy. Nevertheless, such analyses require three major things that also need to address in this article 1. How far are the data reliable? How can we be sure of the exhaustivity of the data, from 1996 to 2015 in specified country? The effects observed may be just an effect of a better registration of the cancer cases. A detailed description of methods of registration in that country should be provided, to discuss the evolution of incidence rates. 2. To discuss the observed trends, we need information about health facilities in underline country and health policy concerning breast cancer. 3. The application of relevant statistical methods are major concern to get the precise results. Therefore, last two points are lacking and make this work difficult to appreciate, although the subject is of real importance and manuscript comprises of a large data set but needs major revision in terms of data analysis, technical writing, sentence structure improvement, and removal of grammatical errors. Major highlights are pointed out as follow: Introduction Line 79-80: “Vietnam is the 15th most populous country in the world, with a population of 97 million (2020 statistics). Please Cite reference here. Additionally, breast cancer risk factors should also be addressed in introduction. Study design and method This section needs to include relevant statistical methods used for data analysis. It is recommended that use median and IQR for nonparametric data (age diagnosis) and use kruskal wallis test to measure the difference among age groups of diagnosed cases in case of scale measurements and use chi-square where percentages are compared. Further, Join-point regression can be used for trend analysis. Line 115-116 “we computed the point incidence of breast cancer for each 5-year period… 2010, and 2011 - 2015 inclusive”. Briefly, mention how that incidence rate was calculated? Line 118-119: “we calculated the age-standardized incidence rate for each of the 4 periods…” How age-standardized incidence rate was calculated? Line 119-121: “We also employed a segmented Poisson regression model to estimate the change in the incidence of breast cancer over time. All statistical analyses were conducted using the R Statistical Environment….”. It is recommended that use join-point regression technique and report your results in form of estimated annual percentage change (EAPC) with 95% UI. Please mention R version and package name that used for analysis. Results Line 125: findings (13,498 women, or 95%) and same in abstract, are inconsistent with results calculated in Table 1. (Table 1 has 13,948 women, 98%). Additionally report p-value of test difference and chi-square value. Line 133-138, “The average at diagnosis was 52 years (SD 11.6) and 56.3 years (13.4) for women and men, respectively. In women, there was a slight but statistically significant increase …….(Table 2)”. Firstly, data is nonparametric so authors should report median with IQR for age diagnosis, rather than mean and SD. Author reported median age in abstract but results section included mean age? Please be consistent. Authors reported that “in women statistically significant increase in the average age of diagnosis of breast cancer during 1996 and 2015….”. This difference look non-significant; please report p-value with test statistic value. Also, include these results in Table. Table 2 can be revised using joint-point regression estimate (EAPC with 95%UI for each duration). Line:143-149: “Segmented regression indicated that there were two trends in the incidence of breast cancer in women: the first period occurred between ….(Figure 1). Further analysis showed that there was a statistically significant increase in the age-specific incidence of breast cancer over the period of 1996 and 2015, and the increase ….(Figure 2). In women, the increase in the age-specific incidence rate was observed among those aged…..”. Join-point regression is widely used trend analysis technique and segmented regression is a part of it. Therefore, it is suggested that use main name of the technique for convenience of the readers. Figure 1 and 2 , are not readable. A better presentation is needed here. Author should draw the trends across ages, years and cohort by year and age group (e.g. within age Group, within year and within cohort). Through these 3 figures Table 2 results can be well representative. Line 160: Table 3. Briefly explain how the standardization was performed (ASR)? Conclusion Line 53-54: “These very first data from Vietnam suggest that although the incidence of breast cancer in Vietnam remains relatively low, it has increased over time, and that the increase was mainly attributable to those age groups of 50 and 70”. Finally, authors concluded that “Our data also confirm that Vietnamese women tend to have breast cancer at younger ages compared to Caucasian women”. Younger ages? Conclusion is not consistent with the findings. (Further, most of the GBD studies reported that women breast cancer is more prevalent in older ages worldwide). Make any changes to the abstract that align with those made in the text. Minor comments Line 34: Revise sentence structure (In line with the related literature, for example, see following literature) 1. (Nguyen TP, Luu HN, Nguyen MV, Tran MT, Tuong TT, Tran CT, Boffetta P. Attributable Causes of Cancer in Vietnam. JCO global oncology. 2020 Feb;6:195-204. 2. Nguyen SM, Deppen S, Nguyen GH, Pham DX, Bui TD, Tran TV. Projecting cancer incidence for 2025 in the 2 largest populated cities in Vietnam. Cancer Control. 2019 Jul 22;26(1):1073274819865274. 3. Pham T, Bui L, Kim G, Hoang D, Tran T, Hoang M. Cancers in Vietnam—burden and control efforts: a narrative scoping review. Cancer Control. 2019 Jul 17;26(1):1073274819863802.) Line 51: age-standardized incidence rate, replace it with ASR as its already mentioned in the abstract. Line 55: those age groups of 50 and 70 years… Line 60: 2019 showed that approx…….. Line 61: improper sentence structure.. What is meant by was also the most..? Line 69: is lower than in Caucasian populations…….. remove “in” Line 71 & 72. Mention reference 5 once after the completion of related information. Line 73: women tends to have breast cancer in ……. Line 125: write as 1st Jan. 1996…… Line 127-128: Rewrite these lines Line 133: word age is missing, modify as … The average age at diagnosis was 52 years …. Line 145: later instead of latter 158: repetitive words in one sentence Line 189: revise the sentence 198: unable to understand the statement Line 202: Asian women tends to …. Line 224: cancer incidence rates in Vietnam's urban population remain ….. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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PONE-D-20-16460R1 Trends in breast cancer incidence in Ho Chi Minh City 1996 - 2015: a registry-based study PLOS ONE Dear Dr. Ho-Pham, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== There are some more issues related to this manuscript according to the first reviewer that need to be addressed. There are also some writing corrections suggested by the second reviewer in the attached file. ============================== Please submit your revised manuscript by Mar 06 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Mohammad R. Akbari Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: The article remain several spelling and gramma error. Some technical error mention in commend should be addressed (attached track-change version). Reviewer #3: The authors have improved the presentation of their work and answered most of my queries satisfactorily. However, I remain very concern about the following points. Therefore, before it can be published, the following points need to clarify in the manuscript. 1. Where authors use the word significant or statistical significant with the results reported, give the p-value or 95% uncertainty interval with that findings, e.g. line 50, 145. 2. For better presentation of results in table 2 it is suggest to authors, insert one column in Table 2 with p-value heading and report p value there for women and men separately, that will indicate the significant difference among periods by ages. 3. To make article results more interesting for readers, I would like to suggest to authors, also draw estimated annual incidence rate by cancer type, e.g. compare Malignant and other cancer type trend (like figure 1), If authors have sufficient data for type of cancer by period. 4. Line 48, Authors reported, “The ASR of breast cancer during 2011-2015 period was 21.5 cases per 100,000 women…”. Why the ASR reported in line 48 and in Table 3 are inconsistent, e.g. women ASR during 2011-2015. Brief clarification needed on how these ASR was calculated? Also need to clarify or fix this confusion. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: Yes: Pham Quang Thai Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 2 |
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Trends in breast cancer incidence in Ho Chi Minh City 1996 - 2015: a registry-based study PONE-D-20-16460R2 Dear Dr. Ho-Pham, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Mohammad R. Akbari Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #3: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #3: Yes: Dr. Sumaira Mubarik |
| Formally Accepted |
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PONE-D-20-16460R2 Trends in breast cancer incidence in Ho Chi Minh City 1996 - 2015: a registry-based study Dear Dr. Ho-Pham: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Mohammad R. Akbari Academic Editor PLOS ONE |
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