Peer Review History
| Original SubmissionSeptember 14, 2020 |
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PONE-D-20-28926 Not by the light of the moon: investigating circadian rhythms and ecological predictors of calling in Bornean great argus PLOS ONE Dear Dr. Clink, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 12 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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The following resources for replacing copyrighted map figures may be helpful: USGS National Map Viewer (public domain): http://viewer.nationalmap.gov/viewer/ The Gateway to Astronaut Photography of Earth (public domain): http://eol.jsc.nasa.gov/sseop/clickmap/ Maps at the CIA (public domain): https://www.cia.gov/library/publications/the-world-factbook/index.html and https://www.cia.gov/library/publications/cia-maps-publications/index.html NASA Earth Observatory (public domain): http://earthobservatory.nasa.gov/ Landsat: http://landsat.visibleearth.nasa.gov/ USGS EROS (Earth Resources Observatory and Science (EROS) Center) (public domain): http://eros.usgs.gov/# Natural Earth (public domain): http://www.naturalearthdata.com/ Additional Editor Comments (if provided): As you can see both reviewers were highly complementary of your work. Reviewer #2 does ask for some clarification throughout the manuscript so please review those suggestions carefully. In a few places they suggest additional statistical analyses so please consider those but only use them if the authors feel it would be central to the goals of the research and would add clarity to the outcomes. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I reviewed this paper before for Ibis and unfortunately they did not accept it - clearly the different reviewers and the editor disagreed. I thought then, and I think now, that this is a sound paper and the changes I suggested when it was under review for Ibis have been incorporated so I have nothing else to suggest. Just fix the referencing style on page 5 (names of the authors rather than numbers). Vincent Nijman, Oxford, 8 October 2020 Reviewer #2: REVIEW OF MANUSCRIPT PONE-D-20-28926 This is a well-written manuscript describing the vocal activity of the Bornean great argus, a threatened species that is particularly known for its amazing visual display to attract females. The methods and analyses are adequate, and the findings are relevant for understanding more about the species’ behavior and ecology. Should be an important contribution to the field. I have made some minor commentaries throughout the manuscript regarding some points that were unclear for me. The main issue I’d like to highlight would be to improve clarity in the statistical methods used and to consider making some adjustments that are detailed below. Finally, I’d like to commend the authors for the nice work done here. Line-by-line commentaries Title When I read “ecological predictors”, I expected to find goals associated with population or interactions, as competition. But the predictors used could be names as environmental variables. Perhaps you could change to “…: environmental drivers of circadian calling activity…”. Introduction L. 43-51: The opening paragraph lacks a message of what’s coming next. It highlights the prospects and research gaps of PAM, but that’s just the method. It would be more interesting to be introduced with a message related to the core ecological aspect of the manuscript. For instance, why is vocal behavior important and what are the drivers of calling activity? Then, in the next paragraphs, you could describe why we still know little about these behaviors, and how PAM can help to fill this gap. L. 47: There are large-scale and temporal efforts to obtain calling behavior data, such as citizen science projects. Perhaps you could say that it requires substantial efforts, not that it is impossible. L. 97-102: It would be interesting to see a paragraph introducing the potential effects of the lunar cycle in calling activity, in general, and also for birds. Additionally, it would also be interesting if the function of these calls could be introduced. Are they courtship calls? How are they characterized? Are there differences in the function of these calls? Methods L. 107: Please, include the unit type of the coordinates (degrees?), indicate latitude and longitude, and datum (WGS84?). L. 113: Were the recordings made in stereo? L. 116: Include a few words describing how are gibbon calls (frequency range, duration, stereotyped, or not). L. 145-146: All the monitored hours were inspected by the observer? L. 147: Was the 10-day period used in the analysis? L. 151: It is really difficult to see the differences between the two call types in the LTSA. Did you also zoomed in the spectrogram to distinguish between the call types, or used always 24-hour LTSA + aural discrimination? What are the advantages of using LTSA and “zoomed-in” spectrograms, like those available in Audacity/Raven? This information can be useful for the reader interested in using LTSA. Figure 2: The resolution from the downloaded figure is not good. For instance, in figure 2.A, it is not clear what the first arrow points to, although the legend says it is a call. Particularly, if this is the resolution used to identify events of call by one observer, it raises doubts if it was possible to discriminate calls. Please, indicate in the methods if the observer used the entire range of 0-8000 Hz to screen for the calls, or the 0-1600 Hz (shown in 2.C and 2.D). L. 154: Please, add full LTSA meaning. L. 159: Add “software” after Triton. L. 179: You could add the models and its variables in table 1 in the form of “questions” or “set” of tests. For instance, 1. 24-hour calling activity? 1.1 Presence/absence of call events ~ variables 1.2. Total number of calls ~ variables 2. Night activity? 2.1 Pres/absence of call events (18:00-06:00) ~ variables 2.2 Total number of calls (18:00-06:00) ~ variables 3. Differences in call type? Number of calls ~call type * calling period L. 181: Each model contains only one predictor? If so, please amend this to this sentence. L. 187: Are the number of argus calls the number of notes, or call events? Please, describe this in the previous section. L. 209: Did you also included a model with intercept only (null model)? This should be done to understand how different your best model is from a null one. L. 221: Also add the total number of hours/days evaluated. L. 223: Did you measured the lengths from all calls or a subset of them? L. 221-224: If the previous sentence is “yes”, another information that would be interesting to improve our understanding of the ecology of the great argus would be to understand if any of the meteorological variables and period of the day influence the length of calls. I know this is not included in the goal but consider doing it since you already got the data. L. 225: You could also test if a “response” was more frequent in some period of the day or for some call type. Depending on the results, it may indicate that it can function better to male-male interactions, for instance. Results L. 250: Please, include the hours corresponding to the morning and evening periods. L. 253: There is no information about a model representing the effect of rain in table 3. L. 255: Here you say the model was compared with a null one, but also include that in the methods. Additionally, it is not clear if you ranked each model with a null one, or if you ranked all models + null. I think the last option is better, as we can check if there are models equally plausible. L. 256: It would be nice to see a table with the models ranked, containing delta AICc, AICc, and the weights. L. 304: Previously, I had understood that you used presence/absence from the night period as the response variable. But why the calling period enter as a predictor here? Discussion L. 348: You could explore if there are differences in calling activity between months, and indicate, for instance, which month were the individuals engaging more in calling activity. These suggestions for new analysis help in filling the gap that is raised in this sentence (little is known about the behavioral ecology of great argus…). L. 378-379: Would it also be possible that visual display is unfavored during new moon, and thus engaging in acoustic advertising would be a strategy of communication? Check if the other references indicate a role of moon phase in the pattern of visual display. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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Not by the light of the moon: investigating circadian rhythms and environmental predictors of calling in Bornean great argus PONE-D-20-28926R1 Dear Dr. Clink, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Dennis M. Higgs Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-20-28926R1 Not by the light of the moon: investigating circadian rhythms and environmental predictors of calling in Bornean great argus Dear Dr. Clink: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Dennis M. Higgs Academic Editor PLOS ONE |
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