Peer Review History

Original SubmissionSeptember 8, 2020
Decision Letter - Katalin Andrea Wilkinson, Editor

PONE-D-20-28238

Evaluation of underweight status may improve management among adults being evaluated for pulmonary tuberculosis in Kampala, Uganda.

PLOS ONE

Dear Dr. Kitonsa,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Nov 23 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols

We look forward to receiving your revised manuscript.

Kind regards,

Katalin Andrea Wilkinson, PhD

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. Please include additional information regarding the survey or questionnaire used in the study and ensure that you have provided sufficient details that others could replicate the analyses. For instance, if you developed a questionnaire as part of this study and it is not under a copyright more restrictive than CC-BY, please include a copy, in both the original language and English, as Supporting Information, or include a citation if it has been published previously.

3. In the Methods, please discuss whether and how the questionnaire was validated and/or pre-tested. If this did not occur, please provide the rationale for not doing so.

4. In your Methods section, please provide additional information about sample size determination, participant recruitment method and the demographic details of your participants. Please ensure you have provided sufficient details to replicate the analyses such as: a) approach to sample size and power calculations, b) a description of any inclusion/exclusion criteria that were applied to participant recruitment, c) a table of relevant demographic details, d) a statement as to whether your sample can be considered representative of a larger population, and e) a description of how participants were recruited.

5. We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions.

In your revised cover letter, please address the following prompts:

a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially identifying or sensitive patient information) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent.

b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. Please see http://www.bmj.com/content/340/bmj.c181.long for guidelines on how to de-identify and prepare clinical data for publication. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories.

We will update your Data Availability statement on your behalf to reflect the information you provide.

6. Please ensure that you refer to Figure 2 and 3 in your text as, if accepted, production will need this reference to link the reader to the figure.

7. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Evaluation of underweight status may improve management among adults being evaluated for pulmonary tuberculosis in Kampala, Uganda.

Abstract

- Author should clearly define the main purpose of this study

- Line 32-33: Patients reported median two symptoms (interquartile range [IQR] 0, 6). The following sentence is not clear .

Materials & methods

- Could you please reorganize this section as follow?

o Study setting & design;

o study participants (population and sampling): based on fig 1 , please provide clearly explanation and you should complete the last step or line TB+ 121 & TB- 363.

o study variables

o data collection process

o Statistical analysis

o Ethical considerations (please provide the number for reference)

- Line 87-88: All individuals had their weight (in kg) and height (in meters) taken using a SECA-216 stadiometer and weighing scale (Seca Industries, Hamburg). Please revise this sentence …. It is a bit confusing.

Results

- Table 1 : Please provide the P value or mark by star the significant results and use footnotes

Conclusion:

Line 297-298: In summary, our results suggest that BMI assessment and number of symptoms should be included as part of the clinical decision-making process among adults presenting for evaluation of possible pulmonary TB.

Reviewer #2: i. Introduction:

Query 1: The author states, “Most discussions of clinical decision-making for TB center on risk factors for developing TB and on the presence and severity of characteristic symptoms. Body mass index (BMI) is often not given the same consideration but may be useful in identifying high-risk patients.”

Loss of weight is one of the main constitutional symptoms for tuberculosis (TB), and therefore this, in addition to any of the other constitutional symptoms remains a useful tool for clinical diagnosis of TB. Since weight is one of the components used to calculate the BMI, it is not surprising that low BMI will also be associated to clinical TB diagnosis. I therefore wonder if using BMI improves TB management as stated in the title or it contributes to confirming the clinical impression of TB?

As correctly stated, TB treatment centers particularly in low income countries struggle with carrying out basic clinical parameters such as weight and blood pressure, usually because of lack of availability of the necessary equipment. Thus an additional measure of height and then the calculation of BMI is very desirable but rather impractical. I am not sure about the relevance and translation of suggesting the use of BMI as an additional clinical tool for TB diagnosis.

ii. Methods:

Query 2: “We analyzed six symptoms: chronic cough (defined as cough lasting at least two weeks), fevers, weight loss (unexplained and sufficient to make clothes loose), chest pain, coughing up blood (hemoptysis), and night sweats (drenching).”

The authors measured six symptoms. I noted the omission of anorexia which is also one of the main constitutional symptoms of TB. Is there any reason why this was left out in the assessment?

What would add value is assessing a symptom or sign outside the main constitutional symptoms and evaluating this to aid in confirming clinical diagnosis of TB such as blood pressure or any other.

Query 3: “Body Mass Index (BMI) was computed as weight (kg) divided by height (meters squared) and categorized as underweight (less than 18.5 kg/m2), normal weight (18.5 to 24.9 kg/m2), overweight (25 to 29.9 kg/m2) or obese (over 30kg/m2).”

Was the BMI calculation carried out on site at the TB treatment centers? Who calculated the BMI? Knowledge of this will help in confirming feasibility. If the BMIs were calculated at the point of statistical analysis, the suggestion of using BMI in clinical care will then remain theoretical.

Query 4: “A multivariable logistic regression model was used to explore the relationship between BMI, number of TB symptoms and TB status.”

The author needs to describe these models better stating what variables were adjusted, what levels of significance were considered. Was it stepwise forward or backward?

Query 5: The study was approved by the Ethics Review Committee of the Makerere University School of Public Health, Kampala-Uganda.

Please add the ethical approval reference number. Was ethical approval sought to use data from the TB registries at the study sites?

iii. Results:

Query 6: “Participants were patients aged ≥15 years who underwent diagnostic evaluations for possible pulmonary TB at four TB Diagnostic and Treatment Units in Kampala, Uganda (including one large public clinic, two smaller private clinics, and an HIV clinic). TB evaluation at these facilities typically included sputum Xpert MTB/RIF testing [Cepheid, Inc] according to routine clinical laboratory procedures. Between 22nd May 2018 and 29th February 2020, patients who received a TB diagnosis were invited to enroll in our study; except during specified months at the largest clinic (during which all patients were eligible regardless of location of residence), enrollment was limited to residents of certain nearby zones.”

“BMI, TB symptoms, and culture status were determined for 121 patients with culture-positive TB and 363 patients with negative culture results (S1 Fig).”

The study enrolled participants over a period of almost two years in a setting where there is bound to have a high number of TB patients. The authors have not stated how many TB patients they actually screened and enrolled. They immediately report only on the number that was evaluated for sputum culture. It is also not clear how they selected the patients for sputum culture? Were there any potential biases?

Were BMIs calculated on all the patients they enrolled or for only those that had a sputum culture result?

The results presented were all based on those with a TB culture result. They didn’t describe the rest of the population. It would have been good to have a general description of the whole study population and then after focus on those with a culture result.

iv. Discussion:

Query 7: “A clearer understanding of the clinical signs and symptoms most predictive of TB could help improve the early management of patients presenting for diagnosis of pulmonary TB, particularly in situations where reliable diagnostic tests are unavailable or their results are likely to be delayed. In this study, we estimated the accuracy of number of TB symptoms alone and in combination with BMI inidentifying culture-positive pulmonary TB among patients presenting to health facilities in Kampala, Uganda.”

I am not sure that the clinical signs and symptoms most predictive for TB were assessed independently in this study. This can be done since most of the constitutional symptoms of TB were collected with the exception of anorexia. This would further confirm if weight loss or low weight independently have strong associations with a positive TB culture. If they do, then if would be sufficient to rely on them without the additional impractical measurement of a BMI. However, calculation of BMI is still highly recommended for quality clinical care.

The authors could have also explored other symptoms or signs and assessed their prediction independently or in addition to the constitutional TB symptoms. This would have added more to the existing knowledge gap.

Query 8: “Our findings support the inclusion of BMI among the clinical indicators that are considered by clinicians when they consider empiric initiation of TB treatment.”

I think this is a sweeping statement especially since we are not sure who and where the BMIs were calculated. And also because TB patients present with a history of weight loss, as well as actual low weights. Therefore, the BMI measurements of these patients are also bound to be low. I am not sure about the additional value of adding BMI measurement in already struggling health systems.

v. Conclusion:

Query 9: “Although the clinical utility of any specific algorithm would require further validation, these findings suggest that consideration of BMI adds diagnostic value above and beyond symptom count alone.”

This statement needs to be revised especially since there are methodological weakness with the choice of using BMI as main component, selection of patients assessed, and lack of clear regression model analysis description.

Query 10: It is not clear if the authors followed the STROBE guidelines when writing this manuscript? They would greatly help improve it.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Ghislain Poda

Reviewer #2: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Attachments
Attachment
Submitted filename: Reviewers comments.doc
Attachment
Submitted filename: PLOS review_PONE-D-20-28238.pdf
Revision 1

We are grateful to both reviewers, their comments and suggestions have helped us shape a more clearer manuscript in methodology, objective and results. Reviewers' comments have also informed our next steps following this research: that is for example to study the practicability of performing BMI in a busy health care setting.

Attachments
Attachment
Submitted filename: Response_to_Reviewers-[PONE-D-20-28238R].docx
Decision Letter - Katalin Andrea Wilkinson, Editor

Evaluation of underweight status may improve identification of the highest-risk patients during outpatient evaluation for pulmonary tuberculosis

PONE-D-20-28238R1

Dear Dr. Kitonsa,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Katalin Andrea Wilkinson, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Formally Accepted
Acceptance Letter - Katalin Andrea Wilkinson, Editor

PONE-D-20-28238R1

Evaluation of underweight status may improve identification of the highest-risk patients during outpatient evaluation for pulmonary tuberculosis.

Dear Dr. Kitonsa:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Associate Professor Katalin Andrea Wilkinson

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .