Peer Review History

Original SubmissionJuly 9, 2020
Decision Letter - Birinchi Sarma, Editor

PONE-D-20-18342

Response of oat morphologies, root exudates, and rhizosphere fungal communities to amendments in a saline-alkaline environment

PLOS ONE

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We look forward to receiving your revised manuscript.

Kind regards,

Birinchi Sarma, PhD

Academic Editor

PLOS ONE

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[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

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Reviewer #1: Yes

Reviewer #2: Yes

**********

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Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

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Reviewer #1: The topic is on the application of organic amendments to saline-alkaline soil recommended

as an agricultural strategy to improve crop productivity and soil health.

The manuscript is well presented;however, some details must be checked and corrected:

FIGURE 3. (A) iT CAN BE IMPROVED. Not to use colours and maybe to use different patterns.

To check for all figures presentation.

Reviewer #2: The authors described some interesting observation of soil amendments on root exudates and fungal communities in oat plants under saline alkaline conditions. Results from the study show that combined soil application of bio-fertilizer and rotten straw on tolerant Baiyan2 oat cultivar can be effective improving oat morphologies, soluble sugar in rhizosphere in a saline-alkaline environment. The bio-fertilizer amendment also significantly limited disease causing fungi.

Comments:

Materials and Methods: After how many days of soil amendments were the samples collected?

Results: Line 228-229: As per Table 1, a significant change in shoot dry biomass was observed between the oat cultivars (1.9b and 3.4a; different letters indicate significance). However, the text contradicts the result in the table and says no significant change in shoot dry biomass.

Line 267-268: Caoyou1 needs to be added "All tested organic acids except fumaric acid were

significantly reduced in treatments containing rotten straw (R and RF; Table 2) in Caoyou1".

Though the manuscript had necessary comparisons of their results with published results but the entire discussion lacks a quantitative description of each phenomenon. For e.g. Increase in a particular organic acid in root exudate can be explained along with their possible role. In addition, the authors state in their conclusion that "that co-application of a bio-fertilizer and rotten straw, along with a tolerant cultivar, is an effective method to improve crop productivity in saline-alkaline environments. Was any yield/productivity measured? If yes they can add the data or should say that this method can be adopted to improve crop productivity.

Minor corrections:

Line 77: Space between "often" and "affected"

Line 80-83: Reframe line 80-83

Line 82- Replace "benefit" with "beneficial"

Line 83-Space between "acid" and "in" in "acidin"

LINE 215: Expand ANOVA as analysis of variance

Line 261: Replace"Cayou1" with "Caoyou1"

Line 391- Replace "negative" with "negatively"

Line 391: Add "where" before "root"

Line 392: Rewrite the part “whatever plants grown in the non-sterilized and sterilized soils".

Line 398: Remove “to” in between "restricted to plant growth"

Line 425- "indicated" to be replaced with "indicates"

Line 459: Replace "related" with "relative"

Line 462: Replace "fungal observed richness" with "observed fungal richness"

Line 469: Replace "decreased" with "decrease"

Line 468-472: Reframe the sentence and check the need to write "not" between "could" and "prevent"

Figure 1: x-axis legend "e" missing from root volume

**********

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Reviewer #1: Yes: Marcela Pagano

Reviewer #2: Yes: Akansha Jain

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Revision 1

Below are our point-by-point responses to the editor's and referees' comments: The reviewers and editor’s comments are given in blue font, our responses in black font.

Reviewer #1: The topic is on the application of organic amendments to saline-alkaline soil recommended

as an agricultural strategy to improve crop productivity and soil health.

Comments:

The manuscript is well presented; however, some details must be checked and corrected:

FIGURE 3. (A) iT CAN BE IMPROVED. Not to use colours and maybe to use different patterns.

To check for all figures presentation.

Response: Thanks for your comments. According to your suggestions, we have changed the colors to the different patterns in Figure 3. We also have checked all figures for presentation.

Reviewer #2: The authors described some interesting observation of soil amendments on root exudates and fungal communities in oat plants under saline alkaline conditions. Results from the study show that combined soil application of bio-fertilizer and rotten straw on tolerant Baiyan2 oat cultivar can be effective improving oat morphologies, soluble sugar in rhizosphere in a saline-alkaline environment. The bio-fertilizer amendment also significantly limited disease causing by fungi.

Comments:

Materials and Methods: After how many days of soil amendments were the samples collected?

Results: Line 228-229: As per Table 1, a significant change in shoot dry biomass was observed between the oat cultivars (1.9b and 3.4a; different letters indicate significance). However, the text contradicts the result in the table and says no significant change in shoot dry biomass.

Line 267-268: Caoyou1 needs to be added "All tested organic acids except fumaric acid were

significantly reduced in treatments containing rotten straw (R and RF; Table 2) in Caoyou1".

Though the manuscript had necessary comparisons of their results with published results but the entire discussion lacks a quantitative description of each phenomenon. For e.g. Increase in a particular organic acid in root exudate can be explained along with their possible role. In addition, the authors state in their conclusion that "that co-application of a bio-fertilizer and rotten straw, along with a tolerant cultivar, is an effective method to improve crop productivity in saline-alkaline environments. Was any yield/productivity measured? If yes they can add the data or should say that this method can be adopted to improve crop productivity.

Response: Thanks for your comments. First, we have added the sample collection time in Materials and Methods part (Line 139). Second, we have corrected the “shoot dry biomass” to “root dry biomass”(Line 230), and we have added “in Caoyou1”(Line 269-270) in Results part. Third, we have added the sentence “Increased in oxalic, malic, citric acids and so on in root exudates can be acted as chemoattractants of soil microbes during both pathogenic and beneficial interactions [1, 2].” in Discussion part (Line 417-419) to make it more clear. Fourth, we have corrected the “productivity” to the “growth” and have added “, which can be adopted to improve crop productivity” in order to make it more clear here in Conclusions part (Line 494-495).

1. Lombardi N, Vitale S, Turra D, Reverberi M, Fanelli C, Vinale F, et al. Root exudates of stressed plants stimulate and attract trichoderma soil fungi. Mol Plant Microbe Interact. 2018;31(10):982-94.

2. Huang X, Chaparro JM, Reardon KF, Zhang R, Shen Q, Vivanco JM. Rhizosphere interactions: root exudates, microbes, and microbial communities. Botany. 2014;92(4):267-75.

Minor corrections:

Line 77: Space between "often" and "affected"

Response: We have corrected it.

Line 80-83: Reframe line 80-83

Response: We have reframed this sentences.

Line 82- Replace "benefit" with "beneficial"

Response: We have corrected it.

Line 83-Space between "acid" and "in" in "acidin"

Response: We have corrected it.

LINE 215: Expand ANOVA as analysis of variance

Response: We have corrected it.

Line 261: Replace"Cayou1" with "Caoyou1"

Response: We have modified it.

Line 391- Replace "negative" with "negatively"

Response: We have modified it.

Line 391: Add "where" before "root"

Response: We have modified it.

Line 392: Rewrite the part “whatever plants grown in the non-sterilized and sterilized soils".

Response: We have modified it.

Line 398: Remove “to” in between "restricted to plant growth"

Response: We have modified it.

Line 425- "indicated" to be replaced with "indicates"

Response: We have modified it.

Line 459: Replace "related" with "relative"

Response: We have modified it.

Line 462: Replace "fungal observed richness" with "observed fungal richness"

Response: We have modified it.

Line 469: Replace "decreased" with "decrease"

Response: We have modified it.

Line 468-472: Reframe the sentence and check the need to write "not" between "could" and "prevent"

Response: We have modified it.

Figure 1: x-axis legend "e" missing from root volume

Response: We have modified it.

Thanks again.

Sincerely yours,

Dr. Jinghui Liu

Professor of Agronomy

Attachments
Attachment
Submitted filename: Response to reviewers.docx
Decision Letter - Birinchi Sarma, Editor

Response of oat morphologies, root exudates, and rhizosphere fungal communities to amendments in a saline-alkaline environment

PONE-D-20-18342R1

Dear Dr. Liu,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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Kind regards,

Birinchi Sarma, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Formally Accepted
Acceptance Letter - Birinchi Sarma, Editor

PONE-D-20-18342R1

Response of oat morphologies, root exudates, and rhizosphere fungal communities to amendments in a saline-alkaline environment

Dear Dr. Liu:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Birinchi Sarma

Academic Editor

PLOS ONE

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