Peer Review History
| Original SubmissionJuly 9, 2020 |
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PONE-D-20-21284 Interruption of an MSH4 homolog blocks meisose in metaphase I and eliminates spore formation in Pleurotus ostreatus PLOS ONE Dear Dr. Scholtmeijer, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.
Based upon the comments of the Reviewers and my own analysis of the manuscript, the following changes must be made in a revision prior to acceptance:
Reviewer 1 was more critical than Reviewer 2 in their evaluation, I concur with the first reviewer and have individually found several additional issues of concern regarding the evidence for the presence of the MSH4 gene in P. ostreatus (discussed above). I have evaluated the manuscript independently. In addition to the issues raised above, I have suggested rewording of parts of the abstract to increase clarity.
Please address all of the issues of Reviewer 1 and the AE responding with the previous and new line number of the changed text. As a note, any statement of a Reviewer's desire to publish the manuscript is inconsistent with the decision making process of PLOS One where the AE makes the decision based upon the factors described in the Editorial Policy.
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We will change the online submission form on your behalf. Please know it is PLOS ONE policy for corresponding authors to declare, on behalf of all authors, all potential competing interests for the purposes of transparency. PLOS defines a competing interest as anything that interferes with, or could reasonably be perceived as interfering with, the full and objective presentation, peer review, editorial decision-making, or publication of research or non-research articles submitted to one of the journals. Competing interests can be financial or non-financial, professional, or personal. Competing interests can arise in relationship to an organization or another person. Please follow this link to our website for more details on competing interests: http://journals.plos.org/plosone/s/competing-interests 3. Please amend either the title on the online submission form (via Edit Submission) or the title in the manuscript so that they are identical. 4. We note that you have included the phrase “data not shown” in your manuscript. Unfortunately, this does not meet our data sharing requirements. PLOS does not permit references to inaccessible data. We require that authors provide all relevant data within the paper, Supporting Information files, or in an acceptable, public repository. Please add a citation to support this phrase or upload the data that corresponds with these findings to a stable repository (such as Figshare or Dryad) and provide and URLs, DOIs, or accession numbers that may be used to access these data. Or, if the data are not a core part of the research being presented in your study, we ask that you remove the phrase that refers to these data. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors revealed a gene as causal agent of sporeless trait in P. ostreatus cultivar "SPOPPO". In addtion, It is also interesting to clearly show the genetic relationship between sporeless and geotropism trait, which had been mentioned previously. However, this manuscript lacks basic data to their claims, which needs to be fulfilled for publishing. Major points: In this paper, the authors concluded that MSH4 is the causative gene of the sporeless trait in the mutants, and that MSH4 has versatility as a breeding target for developing sporeless cultivars in various species including Pleurotus sp. and Agaricales. 1. Please consider adding the following data to ensure the reliability of data of MSH4 in P. ostreatus. ・List the accession number of MSH4 in P. ostreatus. ・Specify the start codon and stop codon, promoter and terminator region in S1 and S2 file. (Actually, I couldn't open the S1 file. Check the format) ・Add the expression analysis by parts of fruiting bodies. 2. This manuscript lacks data to claim its versatility. If the authors intend to claim its versatility in latter revising manuscript, please add the following data and descriptions. ・description of how to use MSH4 as a target in sporeless breeding. ・comparison between sequences (gene and amino acid) of MSH4, derived from P. ostreatus, S. commune and P. pulmonarius. Minor points: Line71 Clarify the characteristics of ATCC58937, which is the base of SPOPPO. ・Degree of decrease in sporulation. ・Specify the relationship between sporeless and geotropism, which has been mentioned in the past. Also indicate whether it is positive or negative geotropism. ・About the mutation controlled by a single gene. Line313 Coprinopsis cinereus→Coprinopsis cinerea Line457 What does the "cluster" mean? Effect by the geotropism? Line461 substate→substrate? Reviewer #2: Interruption of an MSH4 Homolog Blocks Meiosis in Metaphase I and Eliminates Spore Formation in Pleurotus ostreatus PONE-D-20-21284 The manuscript reports MSH4 gene as a breeding target for sporeless strains. The article is weel written and present novelty to the state-of-the-art. The relevance of the advance reported is due to the poor development of breeding programs in cultivated mushrooms compared to other commercial crops such as plants. For instance, it sets the basis for the production of sporeless varieties such as the commonly Pleurotus variety SPOPPO widely cultivated in Europe. Sporeless varieties can prevent allergic sensitivity to airborne conidia, commonly in oyster mushroom in pickers. The genetic techniques employed are accurate and a protocol for Pleurotus transformation is presented. It is suitable for publication in Plos One in the form submitted. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Yasuhito Okuda Reviewer #2: Yes: Jaime Carrasco [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Interruption of an MSH4 homolog blocks meiosis in metaphase I and eliminates spore formation in Pleurotus ostreatus PONE-D-20-21284R1 Dear Dr. Scholtmeijer, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Arthur J. Lustig, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Thanks for the detailed revision. Please be careful to maintain the consistency of the text after the correction. I look forward to the progress of your research in the future. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Yasuhito Okuda |
| Formally Accepted |
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PONE-D-20-21284R1 Interruption of an MSH4 homolog blocks meiosis in metaphase I and eliminates spore formation in Pleurotus ostreatus Dear Dr. Scholtmeijer: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Arthur J. Lustig Academic Editor PLOS ONE |
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