Peer Review History
| Original SubmissionApril 2, 2020 |
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PONE-D-20-09432 MTB and Rifampicin Resistance TB using Gene-Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study PLOS ONE Dear Dr. Wasihun, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jul 23 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Shampa Anupurba, MD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. We note that you have included the phrase “data not shown” in your manuscript. Unfortunately, this does not meet our data sharing requirements. PLOS does not permit references to inaccessible data. We require that authors provide all relevant data within the paper, Supporting Information files, or in an acceptable, public repository. Please add a citation to support this phrase or upload the data that corresponds with these findings to a stable repository (such as Figshare or Dryad) and provide and URLs, DOIs, or accession numbers that may be used to access these data. Or, if the data are not a core part of the research being presented in your study, we ask that you remove the phrase that refers to these data. Additional Editor Comments (if provided): [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: No Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Despite you try TO deal with the current national and global issue, the drug resistance TB, but your manuscript is not well written. I presented some of my comments, but many still left, General comments - Your writing is not consistent terms. E,g since xpert detect only mycobacterium tuberculosis it should be written as “RR_MTB,” but you randomly wrote as RR-TB, RR-MTB. It should be consistent though out the manuscript - There may vocabulary / grammar errors. Incases MTP instead MTB - You use your non standard terminologies: RR-TB positive AND RR-TB negative (table 1). RR_MTB DETECTED OR RR_MTB NOT DETECTED - The texts/ paragraph with our references e.g “….Most studies in Ethiopia used the conventional culture and sensitivity methods not the automated Xpert MTB/RIF assay…” (Introduction). There are also reliable references. E.g there reference for population size of 6,960,000 of the region is the study from south Africa “Group Accuracy of the Xpert MTB / RIF test for the diagnosis of pulmonary tuberculosis in children admitted to hospital in Cape Town , South Africa : a descriptive study” . All the reference should be checked and reliable Abstract 1. Part of the conclusion is not drawn from your data. In cases you try to highlights the need of a coordinated work in health education despite your data not support it Methodology 1. The study setting is confusing : your describe that there 12 general hospitals, 22 primary hospitals,…… in the region” . You collect data from the five general hospitals and one compressive hospital. On the parag 3 you’re said “There are two general hospitals and one primary hospital which are not included in the study”. 2. Inclusion criteria;-despite you used secondary data (log book) but you exclude children and sample other than the sputum. Why ? 3. Laboratory Processing: it says “Samples were collected before the patients started anti-TB treatment” but on your result there are patents with failure and lost who already on treatment but sample collected for the indication probably as per national protocol 4. HIV testing: you describe the algorithm which could potential be modified as per the change in technology without reference. 5. Quality control: “… the researchers checked and confirmed that the Gene Xpert MTB/RIF assay was done using standard operating procedures”. How it possible for the secondary data? You can obtain SOP but how you know whether they followed or not. Such unnecessary should be modified Result 1. Sociology-demographic, Clinical characteristics and TB results - Using median instead of the mean is more appropriate for your study as the age range 18-112, which seems having extreme age like 112. - The writing style not consistent. E.g (17,471; 57.7 %), 28,996 (95.7 %), 7.9 % 2. Associated Risk Factors of MTB or RR_ MTB Infections - Interpretation of the statistical finding wrong. E.G for AOR of 0.86, your describe as “…females were 86 % times less likely to be infected by TB compared to males”. Rather is should be … female has 26% less likely infected by TB compared to males”. Many other examples found in your result section while you interpreted the associated Risk Factors of for MTB AND RR –TB. This misleading interpretation also reflected in your discussion part. Reviewer #2: Abstract Methods - The authors may delete the period when the data extraction was done (Oct - Dec 2019) given that have also included the focus period Jan 2016 - Dec 2019. Results - The authors mention "high TB infection" which is confusing and yet the study focused on MTB (TB) and RR TB (MDR TB). - The interpretation of the first part of the statement "Likewise rifampicin resistant was more prevalent .....(p<0.05) should be aligned to table 3 findings. Conclusion -The authors need to include a statement on whether the prevalence was high or low - this may eliminate the repetition of figures which are already listed under the results section. - The final recommendation listed is not clear Main text Introduction - Reference 1 - There is a more recent global TB report 2019 - Paragraph 2 - There are 30 MDR TB high burden countries - The authors should replace reference 9 with a more recent reference - The text listed in paragraph 2 is not clear and requires revision Study setting - The authors include detailed geographical information such as longitude and latitude which may not be relevant and can be deleted. - The authors may delete the period when the data extraction was done (Oct - Dec 2019) given that have also included the focus period Jan 2016 - Dec 2019. - The text on the selected and non selected sites can be shortened. This will make it easier to understand. Inclusion criteria - Include "presumptive TB" before adult patients - this is the study population Outcome variables - Delete prevalence. Outcome variable is TB and RR TB Data collection - It is not clear whether the patient records were paper based or electronic. Ethical consideration - This text can be shortened Results Table 1 - The total for the variables under TB treatment history is (41,300) is more than the sample size (30,300). The figures need to be verified Associated risk factors for MTB infections - The authors use "infected by TB" which may confuse the reader. They may consider using "TB" e.g. ...."less likely to have TB" as opposed to "less likely to be infected by TB" - The authors do not need to list all the odds for the different age groups since they are reflected in table 2. The odds show a decreasing trend and can be summarized as such. - The authors do not need to list all the odds for the "TB treatment history" groups since they are reflected in table 2. This may be summarized by mentioning that the odds of TB were higher among previously treated patients. Table 2 - Column proportions would be more informative especially when comparing proportions across the independent variable groups by the outcome variable. Table 3 - Column proportions would be more informative especially when comparing proportions across the independent variable groups by the outcome variable. - Does changing "HIV negative" to the ref group in the bi-variate and multi-variate analysis change the results. It would be good to run the analysis for comparison. Prevalence of MTB and RR-TB by years - Figure 2 - Does "total patients refer to "presumptive TB"? This should be clarified - While the authors state that the prevalence of TB has reduced over time, it is important to also make a comment on the absolute numbers which have increased over time. The numbers for RR TB are not included on the figure. Discussion - Paragraph 2 - The authors list that their findings are more or less comparable and then include contradicting statements thereafter. They list all the proportions for the various studies in reference which might not be necessary. The authors may include a summary statement and simply quote the references. Paragraph 2 - Text can be reduced. Authors list all proportions from other studies which makes the text really long. The authors may include a summary statement and simply quote the references. - Paragraph 2 - It is not clear why the authors compare their findings to a study conducted in Uganda (29) which focused on children. They excluded children. Furthermore, the two populations differ in disease patterns which would also . It makes more sense for the authors to limit the comparison to adult studies. - Paragraph 3 - The high prevalence of TB in studies from Somalia, Pakistan, Bangladesh..... reflects the higher disease burden in these countries. - Paragraph 3 - See comments above on "TB infection" and "more infected by TB" Conclusion - See comments above (abstract) Reviewer #3: Comments to the Author Manuscript Number: PONE-D-20-09432 Title: MTB and Rifampicin Resistance TB using Gene-Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study This is an interesting study that potentially represents the prevalence of tuberculosis and multidrug resistant tuberculosis in in Tigray, Northern Ethiopia. This study also giving information about increasing trend of multiple drug resistance against TB which an alrming condition. General comments This study is well described, however there are certain limitations in the study that need to be addressed. Title: Title is not matched with study. Title could be better like “ Frequency of MTB and Rifampicin Resistance TB using Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study” instead of “MTB and Rifampicin Resistance TB using Gene-Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study” Abstract: � This is not Prevalence study so replace prevalence words by frequency � Replace Gene-Xpert-MTB/RIF Assay by Xpert-MTB/RIF Assay Methods: � Please correct timing of study because you wrote October 2019 to December 2019 in one line and January 2016 to December 2019 in other line. Results: � Line number 6, Please write number out of total and then write percentage in bracket. For example you wrote in line number 3, 17,471 (57.7 %) were males. � It would be better if you shows the significant value with males and previous history that how much it is significant Conclusion: Don’t start paragraph with number like 7.9% Introduction: � It would be better if you define 1st susceptible and resistant tuberculosis, Rifampecin resistant and then MDR-TB. You can help from this article (Javaid A, Ullah I, Masud H, Basit A, Ahmad W, Butt ZA, Qasim M. Predictors of poor treatment outcomes in multidrug-resistant tuberculosis patients: a retrospective cohort study. Clinical Microbiology and Infection. 2018 Jun 1;24(6):612-7). � Paragraph 3, line 6. Write RR-TB in full instead of abbreviation 1st and check thought out the manuscript. Materials and Methods � Please make a table or box and write all the definition like Variables, outcomes relapse, failure, relapse etc Results: � Please go through overall papers as some paragraphs are confusing and not clear. Rephrase it like “According to the results of this study, the overall, prevalence of TB and RR- TB were 7.9 % and 9 %, respectively” and “As can be seen in Table 2, females were 86 % times less likely [Adjusted Odds Ratio (AOR) =0.86; 95 % CI= 0.79, 0.94, p= 0.000] to be infected by TB compared to males. Discussion: � Discussion is overall good but need to be slightly modify it by grammatically ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: Yes: Dr Irfan Ullah [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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PONE-D-20-09432R1 Frequency of MTB and Rifampicin Resistance MTB using Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study PLOS ONE Dear Dr. Wasihun, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. In addition to the reviewer's comment, I noticed that you have missed out the following: 1. "You use your non standard terminologies: RR-TB positive AND RR-TB negative (table 1). RR_MTB DETECTED OR RR_MTB NOT DETECTED"-same changes should be made with respect to MTB DETECTED/NOT DETECTED 2. "Part of the conclusion is not drawn from your data. In cases you try to highlights the need of a coordinated work in health education despite your data not support it".This has been omitted from the abstract,but is still present in the conclusion of the manuscript. Please submit your revised manuscript by Oct 04 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Shampa Anupurba, MD Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Thank you for dressing most of my comments and suggestions in the first draft. I have seen good improvement in the manuscript. However, I have some mirror correction Abstract 1. Change the mean to the median in the abstract, to make it consistent 2. Change “The overall frequency of TB was…” to “The overall frequency of MTB was…’’. Pleases use MTB as Xpert MTB/RIF detects only MTB and its RIF resistant strain but not other species of tuberculosis. Make it consistent in part too Introduction 1. “Its drug-resistant strain called multidrug-resistant mycobacterium tuberculosis (MDR-MTB)….”. This sentence looks confusing as mycobacterium tuberculosis, not the only MDR strain. Please modify it 2. Last paragraph… ‘’ Besides, they were done using culture and drug susceptibility testing methods….’’.I think this is no limitation rather it is good as it detects other species/strain of TB. Good to modify or remove it Methods 1. Outcome variable: not “TB and RR-MTB among presumptive TB patients” rather MTB and RR-MTB among presumptive TB patients 2. Operational definition o MDR-TB: is not “Isolate of M. tuberculosis…..” Not only M. tuberculosis, why other species? modify it o Rifampicin-resistant TB (RR-MTB) change to : Rifampicin-resistant TB (RR-TB) Result Associated Risk Factors of MTB Infections 1 “………1.46 times [AOR= 1.46; 95% CI =1.29, 1.57, p <0.001] times more likely to have………” correct as “………1.46 times [AOR= 1.46; 95% CI =1.29, 1.57, p <0.001] more likely to have………” 2 Change TB to MTB 3. Frequency of MTB and RR- MTB by study years 1. Change “Figure 2 compares the frequency of TB and RR-MTB by study years” to Figure 2 compares the frequency of MTB and RR-MTB by study years. Please do the same for others in this paragraph. Do mix TB and MTB Discussion 1. The same research finding “Addis Ababa, [17]” in opposite comparation. ‘MTB frequency (7.9%) in this study was more or less comparable with previous reports from Addis Ababa, [17]……………………..”. “However, our frequency was higher than studies conducted in Addis Ababa [17]”. please modify the reference “17’’ 2. . change ‘’For Example……” , For example, 3. The sentence (paragraph 4) is opposite to you finding “Of these, participants whose age was 29 years or greater were more infected by TB compared to the 18-29 years age groups (p< 0.05).” pleases modify it 4. Whereas, this study was carried out from 2016 to 2019 where the method was used to all presumptive TB patients. This sentence repeated pleases good to explain with other explanation 5. Correct 3039 to 30-39 6. “Accordingly, the number of TB suspected patients who visited the hospitals significantly increased from 3281 in 2016 to 11023 in 2018. Similarly, the absolute number of TB positive patients has also increased from 408 in 2016 to 793 in 2018. However, the actual percent of TB frequency showed a significant decrease from (12.4%) in 2016 to (6.8%) in 2019” this is the direct copy of the result, pleases do not repeat/ copy rather discuss the concept. for example, the concept can be summerazised like this “A significant decrease in the percentage of MTB frequency while the actual number of TB detection increases show that the regional government and stakeholders have to perform well to tackle tuberculosis in the region ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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PONE-D-20-09432R2 Frequency of MTB and Rifampicin Resistance MTB using Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study PLOS ONE Dear Dr. Wasihun, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Oct 25 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Shampa Anupurba, MD Academic Editor PLOS ONE Additional Editor Comments (if provided): Mycobacterium tuberculosis should be mentioned as italics throughout the manuscript. Abstract- Background 1st line-Delete 'Mycobacterium tuberculosis (MTB) and its' Abstract- 4th line under Results- Please write median age 'of' 40.65 instead of 'was' Abstract- Results-HIV unknown status cannot be associated with high MTB. This does not carry any meaning and should also be deleted from the entire manuscript.The statistical significance may not be shown in Table 1. Methods- Study Setting- Delete 'the' in the sentence 'In this study, general hospitals which introduced Xpert since the 2016 were included.' 'intermediate' Xpert MTB/RIF results should be changed to 'indeterminate' throughout the manuscript. Inclusion criteria- 'We include all presumptive TB'- change include to included Table 1- Under MTB result, mention detected or not detected instead of positive /negative. Discussion- 2nd para,6th line- 'unlike to this study'-delete 'to' 3rd para, 2nd line-'compared to our results which reflects the' delete 'which' 5th para,1st line-'On the other hand, previous treated patients'- write 'previously' 7th para, 2nd line-write geography instead of geographical 'This study; however, included data from 2016 and 2019'- replace 'and' by 'to', delete semi colon 'Xpert-MTB/RIF Assay is recommended to all TB suspected patients'- replace 'is' by 'was'. Also, delete 'with less likelihood of having RR-MTB as the MDR-TB suspected patients used in the other studies'. [Note: HTML markup is below. Please do not edit.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 3 |
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PONE-D-20-09432R3 Frequency of MTB and Rifampicin Resistance MTB using Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study PLOS ONE Dear Dr. Wasihun, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The manuscript has been thoroughly revised. However there are a few minor corrections Introduction: 1st para, 2nd line- Write Mycobacterium tuberculosis instead of mycobacterium tuberculosis Inclusion criteria: indeterminate instead of intermediate (Had been pointed out earlier) Discussion: 2nd para 6th line- delete 'to' in unlike to this study.(Had been pointed out earlier) 7th para, last line - 'MTB/RIF Assay was recommended to all TB suspected patients' replace 'to' by 'for' Please submit your revised manuscript by Nov 07 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Shampa Anupurba, MD Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 4 |
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Frequency of MTB and Rifampicin Resistance MTB using Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study PONE-D-20-09432R4 Dear Dr. Wasihun, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Shampa Anupurba, MD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-20-09432R4 Frequency of MTB and Rifampicin Resistance MTB using Xpert-MTB/RIF Assay among Adult Presumptive Tuberculosis Patients in Tigray, Northern Ethiopia: a cross sectional study Dear Dr. Wasihun: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Shampa Anupurba Academic Editor PLOS ONE |
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