Peer Review History
| Original SubmissionApril 1, 2020 |
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PONE-D-20-09268 Constipation is associated with risk of allergic rhinitis: A nationwide population-based cohort study PLOS ONE Dear Dr Wei, Thank you for submitting your manuscript to PLOS ONE. Before sending out external reviewers, I would like to clarify several points. There are many factors that are associated with constipation: various GI diseases such as cancers and polyps; imbalance in immune and nervous system function, bile acid metabolism and mucus secretion, and the gastrointestinal microbiota and fermentation (e.g., Nat Rev Dis Primers. 2017 Dec 14;3:17095). The authors claimed that the high prevalence of constipation is a risk factor for allergic rhinitis. But, any supporting data are not shown to link these two conditions. Just statistical findings cannot prove your hypothesis (maybe coincidental). In Discussion, the authors described a lot about the results and speculations by other researchers’ studies. However, there are no discussion how these can support your data (i.e., the authors describe others’ speculations to explain your speculations). Please discuss about the presented data. Also, the background of study participants varies. For example, the authors included autoimmune diseases. Please describe more details (e.g., types of diseases), and explain or speculate how each autoimmune disease can be associated with AR and/or constipation (i.e., pathophysiological mechanisms). Before sending out for external/statistical review, I would request the authors to present more detail data showing direct, at least suggestive, evidences for your hypothesis (i.e., underlying mechanisms linking constipation and AR). Otherwise, I highly expect that it will be rejected by external reviewers. We would appreciate receiving your revised manuscript by Jul 04 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Tomohiko Ai, M.D., Ph.D. Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. To comply with PLOS ONE submission guidelines, in Table 1, please report your p-values. For more information on PLOS ONE's expectations for statistical reporting, please see " ext-link-type="uri" xlink:type="simple">https://journals.plos.org/plosone/s/submission-guidelines.#loc-statistical-reporting." 3. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. Additional Editor Comments (if provided): There are many factors that are associated with constipation: various GI diseases such as cancers and polyps; imbalance in immune and nervous system function, bile acid metabolism and mucus secretion, and the gastrointestinal microbiota and fermentation (e.g., Nat Rev Dis Primers. 2017 Dec 14;3:17095). The authors claimed that the high prevalence of constipation is a risk factor for allergic rhinitis. But, any supporting data are not shown. Just statistical findings cannot prove your hypothesis (maybe coincidental). In Discussion, the authors described a lot about the results and speculations by other researchers’ studies. However, there are no discussion how these can support your data (i.e., the authors describe others’ speculations to explain your speculations). Please discuss about the presented data. Also, the background of study participants varies. For example, the authors included autoimmune diseases. Please describe more details, and explain or speculate how each autoimmune disease is associated with AR and/or constipation (i.e., pathophysiological mechanisms). Before sending out for external/statistical review, I would request the authors to present more detail data showing direct, at least suggestive, evidences for your hypothesis (i.e., underlying mechanisms linking constipation and AR). Otherwise, I highly expect that it will be rejected by external reviewers. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-20-09268R1 Constipation is associated with risk of allergic rhinitis: A nationwide population-based cohort study PLOS ONE Dear Dr. Wei, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Your paper was reviewed by three experts in the field and myself. Although the quality of paper is improved, there are still some issues for analyses. Please answer for the comments by the reviewers (clarification of statistical issues). Also, the authors still overstate the results of statistical analyses (e.g., "Constipation was significantly associated with an increased risk of incidental AR"). It should be "might be associated." Since the authors did not show any clinical and experimental evidences to link these two conditions, please tone down and modify these statements seen everywhere in the paper including the title. The authors should strongly emphasize the limitation of study (e.g., lack of laboratory data including cytokines and gene-expression changes, etc.). Please submit your revised manuscript by Oct 11 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Tomohiko Ai, M.D., Ph.D. Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: (No Response) Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Dear Colleagues, It is really interesting and well done work.This study after corrections is more interesting, sounds better and the data are presented clearer. However I have another comment (minor): I think the conclusion is slightly too restrictive , especially second sentence... Of course there were a great number of patients , good statistical tools but it was retrospective analysis and not meta analysis too. Therefore I propose be less restrictive in conclusion and use a term: it seems..." Best regards Reviewer #2: A propensity-matched analysis was conducted to show the association of constipation on time to allergic rhinitis (AR) development. After adjusting for relevant factors, patients with constipation had a 2.3 fold risk of AR compared to those without constipation. Minor revisions: 1- Abstract: Methods: Replace the word “stratified” because the term causes confusion when it is not used based on its statistical definition. Consider using the term subgroup instead. 2- Line 153: Provide a reference for the specific software procedure used to conduct the propensity-score matching. 3- Line 159: For the Kaplan-Meier analysis indicate the start time. 4- In the statistical methods section, state the statistical testing methods used to generate the p-values in Table 1. 5- Line 216: Indicate the methods used to retain the adjustment variables of age, gender, comorbidities and medications in the model. 6- Table 2: For age, the multivariate Cox model should provide an overall p-value for comparing all the categories of age. If significant, a step-down test can be used to make pairwise comparisons. Indicate the overall p-value. 7- Table 3: (a) Provide a more descriptive title. See note #1 above. (b) Table 3: Provide a description for each test of interaction by indicating the variables in the interaction term. (c) Table 3: Clarify what the p-values represent. For instance, in those age 20 the log-rank p-value for comparing the time to allergic rhinitis between those with constipation and those without is 0.001. Is this interpretation accurate? (d) In general, if the interaction effect is significant, provide an interpretation of the results, but do not test main effects because the tests for main effects are uninteresting in light of significant interactions. If interaction effects are non-significant, drop the interaction effects from the model and test the main effects. Determining which results to present when testing interactions is often a multi-step process. 8- Figure 2: Indicate the start time on the x-axis. “Years from xx.) Reviewer #3: This is a large epidemiological study using the National Health Insurance Research Database in Taiwan. Propensity score matching is used to analyze the association between constipation and allergic rhinitis, taking into account possible confounding. Despite the limitations of this study, I think that the results of the study suggest an association between gut microbiota and allergic rhinitis. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Constipation might be associated with risk of allergic rhinitis: A nationwide population-based cohort study PONE-D-20-09268R2 Dear Dr. Wei, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Tomohiko Ai, M.D., Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: (No Response) ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: (No Response) ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: (No Response) ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I think this form of ms is better. All comments were incorporated. The tables and statistical analysis and its description sounds also better. Reviewer #2: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No |
| Formally Accepted |
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PONE-D-20-09268R2 Constipation might be associated with risk of allergic rhinitis: A nationwide population-based cohort study Dear Dr. Wei: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Tomohiko Ai Academic Editor PLOS ONE |
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