Peer Review History
| Original SubmissionFebruary 29, 2020 |
|---|
|
PONE-D-20-05766 Bow-tie structure and community identification of global supply chain network PLOS ONE Dear Professor Ikeda, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by May 31 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Hocine Cherifi Academic Editor PLOS ONE Journal requirements: When submitting your revision, we need you to address these additional requirements: 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.plosone.org/attachments/PLOSOne_formatting_sample_main_body.pdf and http://www.plosone.org/attachments/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. 3. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Partly Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: No Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: No Reviewer #3: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The paper investigates the topological properties of a sample from the global supply chain network and by doing so, it empirically test some propositions inherited from earlier research in the literature. Although the topic is of clear interest and the paper applies adequate methodology to address the research questions, there are several drawbacks found mainly in the exposition of the methodology/results which call for major revisions in the manuscript. First, I would like to add two general comments on the paper. 1. It turns out by the end of the paper, that the main purpose in the background is to empirically test the propositions given in Hearnshaw et. al (2013) in IJOPM. Although this is marked in the introduction, the Abstract does not indicate this and the structure of the paper suggest a different setup. The reader is uncertain about why those topological properties are analyzed which are in the paper until it becomes clear at the end that because these provide the basis for testing the propositions. When discussing the empirical tests, the text continuously refer back to different parts of the topological analysis. I would feel the paper more coherent if this dichotomy between the topological analysis and the tests were resolved. I suggest to merge the two parts and discuss the relevant topological properties wherever they contribute to testing a given proposition. At the same time, it would be important to make very clear from the beginning that the paper uses the topological analysis to give empirical support for the mentioned propositions. 2. The English of the paper is to be significantly improved – without being a native speaker, I felt the text quite difficult to read sometimes and in many places obvious grammatical mistakes are left. Then, some specific comments are made in what follows. 3. Line 7: there should be more discussion of what ‘collective motions’ the Authors are talking about. 4. In the beginning of the Data section, there should be clearly indicated how much companies are involved in the sample, what is their industrial composition, what is the type of the companies (are they large, listed companies or does the sample include SME-s), according to what principle did the companies got into the sample, what is the time period for which the data is relevant? More generally, to what extent can we consider the sample as representative – a crucial issue with respect to the significance and interpretation of the results. Also, we do not know how representative the links are in the sample: according to what principles do links show up in the sample? All links are accounted for, just large transactions, etc.? The representativity of the sample largely determines how meaningful the results are: for example detected communities may be trivial if the sample has some selection bias. 5. The numbers in line 107 do not match with those in Table 1 and Table 2. 6. In line 111: how do these statistics prove the goodness of the data? 7. The number of firms in Table 2 is a magnitude larger than the number reported in Table S2. Maybe this is the number of links gain, but then why is it different from the link number in Table 1? 8. The paper always refer to supply chain networks, but the data covers many other types of links. However, it is not clear if the Authors use only supplier links from the data or other links as well? In the latter case, referring to supply chains is not adequate. 9. In the Community detection section the authors talk extensively about the modularity optimization method, which is not used in the paper. The first paragraph then is unnecessary, should be compressed into a sentence mentioning this method and the drawbacks (plus: why not mentioning other methods as well?). 10. Line 141: the Authors argue that map equation is the best performing method. But according to what? Accuracy or time? Or something else? 11. In line 216 the Authors draw attention to a difference between their results and previous ones. There should be a discussion of this difference. 12. Similarly, in line 220 there is a difference revealed with respect to many other networks. There should be a discussion about the reasons of this difference. 13. In Figures 2 and 4 the random network shows up as a reference. The references represent averages from many randomized networks. However, deviation from this average does not indicate that the observed properties significantly differ from that obtained in a random world. There should be a confidence interval drawn around the average in order to see if this is really the case. The same issue can be raised with respect to the characteristic path length around line 296. 14. The paper uses only one method for community detection. The question naturally arises if the results of community detection are robust to the choice of (adequate) methods? 15. It is not evident what the two representations of the supply chain network in Figures 5 and 6 tell us. How they can be interpreted? Why they are important to be analyzed? 16. What do the ratios in column 3 of Table 5 represent? 17. In line 319 the Authors say that clustering is moderate. But compared to what? 18. In the discussion of Proposition S5, the Authors claim that the degree distributions are exponentially cut off at the tails. In order to convincingly prove this, they should either supply some statistical measurements or at least draw the red lines in Figure 2 up to the edge of the graphs to see the deviation from power law. Reviewer #2: This paper provides an empirical analysis of topological properties of global supply chain network in terms of degree distribution, hierarchical structure, and degree-degree correlation in the global supply chain network. I have many concerns about this paper. The analysis sounds to me quite standard and based on the application of standard techniques in networks theory. From my point of view the contribution to the literature is very limited. Additionally I found the description of the analysis a bit limited. I summarize just a few examples: - a clustering coefficient has been computed. Several clustering coefficients exist in the literature and different versions have been provided for directed networks able to identify different triangles (as in clustering, out clustering, cycles, etc). It is not clear which kind of clustering has been used and how - the author/authors affirm that the distribution follows a power law by means of the observation of the figure. A statistical test is typically needed to provide that a distribution assures a good fit to the data. - it's not clear why the connected component is studied only in the undirected case Finally, the discussion of the proposition seems to me quite standard and I do not see a so significant contribution to the literature. Reviewer #3: Review of PONE-D-20-05766 “Bow-tie structure and community identification of global supply chain network “ This manuscript analyzes a large supply chain network with 1,417,169 firms globally. The key aspect of the data is a directed graph of supplier relations, with 1,439,101 links. The manuscript demonstrates a bow-tie structure, and addresses nine claims, expectations about efficient supply chain networks. While the analysis is rigorous and the data work is careful and appropriate, the conceptualization of the manuscript is insufficient. The motivations to demonstrate a bow-tie structure, and the consequences of a bow tie structure to economic outcomes is not clear. The nine claims about efficient supply chain networks are analyzed without addressing data on efficiency. The two tasks accomplished in the paper – demonstrating a bow-tie structure and addressing nine claims about efficient supply chain networks – are mixed together without clarifying the relationship between these two tasks. Should we think of a bow-tie structure within the framework of an efficient supply chain network? How do the nine claims relate to the bow tie structure? Many figures are un-related to the argument, and are only passingly mentioned in the main text (Fig. 5-7). The network figures are not styled consistently, and the edges are not clearly visible. In general, this manuscript would need to clarify its goals much better in the introduction, and the empirical results would need to be interpreted more carefully. Results and various goals of the manuscript should be much better integrated into a coherent argument. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
PONE-D-20-05766R1 Verifying“efficient supply chain propositions”using topological characterization of the global supply chain network PLOS ONE Dear Dr. Ikeda, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Aug 20 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Hocine Cherifi Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) Reviewer #2: (No Response) Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: No ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The Authors have made a series of substantial changes to the text, the result of which is a significantly improved manuscript. The Authors have reflected on all of my previous concerns and I accept their answers and corrections in most cases. However, I have three minor points which still need to be addressed. I refer to them with the numbers in my previous report. 6. In line 111: how do these statistics prove the goodness of the data? • I think I understand now, but the caption should also mention that total revenue on the vertical axis is measured for companies in the sample, not overall for the country. 11.-12. In line 216 the Authors draw attention to a difference between their results and previous ones. There should be a discussion of this difference. Similarly, in line 220 there is a difference revealed with respect to many other networks. There should be a discussion about the reasons of this difference. • Still I feel that some discussion is missing, or at least clarifying the reasons why this discussion is not given here. 17. In line 319 the Authors say that clustering is moderate. But compared to what? • This should be indicated in the text as well. Reviewer #2: I think the authors have improved the quality of the manuscript by clarifying the aim of the paper. However, I have few remarks: - the network is directed as the authors affirm, but the authors decided to apply some topological indicators using the directed network, while others have been applied using an undirected network. I think this choice must be justified. For instance, this is the case of community detection and clustering. - the authors use the undirected version of clustering coefficient, but I think they must cite the clustering they have used (Watts and Strogatz or Wasserman and Faust). Additionally, although the authors decided to stay in the undirected case, they have to mention that in literature clustering coefficients for directed case exists and cite them (see Fagiolo (2007), Clustering in Complex Directed Networks Clemente, G.P. and Grassi, R. (2018) Directed clustering in weighted networks: a new perspective, Chaos, Solitons and Fractals. Reviewer #3: Most points have been addressed by the authors, and the manuscript has a much clearer argumentation. However, one main concern that I had with the first version of the manuscript is still not sufficiently addressed. This main concern is the lack of conceptual integration of the two major ambitions of the manuscript (1: the bow-tie structure and 2: testing nine propositions of Hearnshaw et al.) The authors managed to integrate testing Hearnshaw et al. into the manuscript much better. But it is still not clear how the bow-tie finding integrates with this ambition. Does the bow-tie structure add a new topological requirement to having an efficient supply chain network? In that case, the bow-tie structure is a conceptual addition to Hearnshaw et al. Or is the bow-tie merely a consequence of Hearnshaw et al.’s requirements that they have not recognized? In that case the bow-tie structure is an empirical discovery that does not alter Hearnshaw et al.’s conceptualization. These concerns are critical, as the own contribution of the manuscript is not clear. The ambition to test Hearnshaw et al. is clear now already in the abstract, but there is no mention about conclusions: what does this manuscript contribute? This is connected with the ambiguous language of “verifying”. While I recognize that there are multiple methodological traditions in science, I would believe that there is the broadest agreement that “verification” is never possible in the empirical sciences, and we should think about “testing” instead. A theory will never be verified, but rather tested, and found support for. I would strongly urge the authors to re-phrase “verification” for testing, with an indication of what aspects of the theory from Hearnshaw et al. they found support for. This could help clarify the contribution of the manuscript as well. If I was the author, I would explore ways in which the novelty of the contribution can be identified, and highlighted already in the abstract. As a more minor point, the network overexpression graphs for the country and industry level are much more readable, but their integration into the ambitions of the manuscript is still not clear. What aspect of Hearnshaw et al. do these talk to? I would not include almost two full page graphs that are part of only a sideline discussion, receiving only a passing mention in the text. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
|
Testing“efficient supply chain propositions”using topological characterization of the global supply chain network PONE-D-20-05766R2 Dear Dr. Ikeda, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Hocine Cherifi Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-20-05766R2 Testing “efficient supply chain propositions” using topological characterization of the global supply chain network Dear Dr. Ikeda: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Professor Hocine Cherifi Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .