Peer Review History
| Original SubmissionSeptember 1, 2020 |
|---|
|
PONE-D-20-27478 The Arf-GEF Steppke promotes F-actin accumulation, cell protrusions and tissue sealing during Drosophila dorsal closure PLOS ONE Dear Dr. Harris, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please respond to comments raised by Reviewers. Please submit your revised manuscript by Nov 09 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Sang-Chul Nam, Ph.D. Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2.Thank you for stating the following in the Acknowledgments Section of your manuscript: [Stocks obtained from the Bloomington Drosophila Stock 442 Center (NIH P40OD018537) were used in this study....Work supported by a CIHR operating grant (82829) to T. Harris. J. West supported by an Ontario Graduate Scholarship.] We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: [Work supported by a Canadian Institutes of Health Research (CIHR) operating grant (82829) to T.H. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. CIHR website: https://cihr-irsc.gc.ca/] Please include your amended statements within your cover letter; we will change the online submission form on your behalf. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: In this manuscript, West and Harris investigate the role for the Drosophila cytohesin Arf-GEF, Steppke (Step) in regulating the morphogenesis of dorsal closure during late embryogenesis. Previous studies from the Harris group showed that Step promotes morphogenetic epidermal spreading during dorsal closure and head involution. However, if and how Step regulates sealing of the epidermis during dorsal closure was unknown. Moreover, Step can promote actin polymerization or antagonize actomyosin depending on the cellular context. Here the authors use live imaging and genetics to investigate Step function in the leading edge actomyosin cable during dorsal closure. In step mutant embryos, initial dorsal closure is delayed. While full dorsal closure eventually occurs in step mutants, tissue sealing is misaligned. The authors show that Step is required for F-actin accumulation in the actomyosin cable at the leading edge (LE) and for dynamic protrusions. While Step can antagonize myosin, activated myosin does not lead to similar F-actin and protrusion defects during dorsal closure. Therefore, the authors next tested if Step works with an F-actin regulator in LE dynamics. The F-actin regulator Enabled (Ena) is known to regulate protrusions at the LE during dorsal closure. The authors find that Step is required for proper Ena localization to cell-cell junctions at the LE. Embryos double mutant for ena and step have much more severe dorsal closure defects compared to either single mutant. This suggests that Step and Ena work together during dorsal closure. Finally, the authors show that overexpression of Step transforms filopodial-like protrusions at the LE to become broader and lamellipodial-like, as well as inducing ectopic lamellipodial protrusions in rear epidermal cells that normally do not have protrusions. These phenotypes require the GEF and PH domains, but not the coiled-coil domain. This manuscript is very well-written, the results are for the most part clear, and the conclusions are supported by the data. I have a few suggestions to clarify some results. 1. The authors show that there is less F-actin accumulation in the LE of step mutant embryos at halfway closure. Does this happen early in formation of the actomyosin cable or later? In other words, can the authors comment on if Step is required for early F-actin enrichment at the cable, or if Step promotes F-actin accumulation during closure? 2. In Figure 2E, and results (lines 230-232), the authors state that the step mutant protrusions are abnormally short. In the images for step mutants, it is a little hard to see any protrusion at all. Instead, there seems to be a focus of Moe-accumulation. This may be due to the resolution of the movie images, but the authors could either show a different set of movie stills or explain why this Moe-accumulation is considered a protrusion. 3. The authors state that “Step is necessary for effective localization of Ena to LE cell-cell junctions” (Fig. 4B; p. 13 lines 280-291). To me, it seems like Ena is still found at cell-cell junctions but the levels are abnormal (maybe some with lower levels and others with normal levels). Can the authors tell if Ena still localizes to all LE cell-cell junctions? 4. The sufficiency of Step to induce broad lamellipodia is very interesting. Did the authors quantify how many ectopic lamellae are found in each LE, rather than just % of embryos with ectopic protrusions? Does Step overexpression induce additional filopodial-like protrusions or does Step just induce broad lamellipodial-like protrusions? Minor comments: 1. For the graphical representation of most data, the authors show each data point. This is very helpful. However, it is often useful to show the mean and SD, for example with a box-and-whisker plot. The authors may want to consider showing this, along with the individual points of data (e.g. Fig. 2B,D,F; Fig. 4B). 2. The authors might consider showing movies for some of the data, in addition to the still images. Reviewer #2: This manuscript comes from a group with an excellent track record in studying regulation of tissue morphogenesis during organismal development. Among the systems they use is dorsal closure of the Drosophila embryo, a nice genetic model for wound healing and developmental epithelial closure. In the present manuscr¬¬ipt the authors characterized Steppke (step), a cytohesin Arf-GEF that promotes actin polymerization in cell culture, but which in whole animals hinders actomyosin function and the authors wanted to address this further in a whole organism approach. In Figure 1, the authors looked at stepZ mutants through live imaging of DC and found that the process is significantly slower in the step mutant, which showed some misalignment and holes at the dorsal midline. The authors use the appearance of dorsal hairs (DH) as a developmental clock (DH) How good is DH as a marker for staging the embryo? Figure 1A shows what is described as sealing and DH onset, but I can’t make out DH in the red square in control embryos. Maybe that is the point, the frame showing the moments before DH? How long does it take for the DH population to emerge completely? Have the authors checked to see if step has any effect on DH? The authors describe a group of cells at the posterior end of the amnioserosa in step mutants that lack F-actin and refer to these cells as “depressed”. What is meant by this? The lack of F-actin in the “depressed” cells could affect their contractility and could this delay canthus closure? Indeed, these cells are highly constricted as can be seen In Fig 2.¬¬There are genes which show elevation in these canthus cells under wild-type conditions and it is worth checking if there is any Step expression in the amnioserosa too. Do any stepMZ embryos make it to DC ? Figure 1 panel E. The dorsal midline in this step mutant does not look like the typical row of cells seen in wild type, instead there are a number of rosettes, which are possibly left over from earlier failed regulation of morphogenesis by Step. Remarkably, the dorsal epidermis has managed to finish the seal despite this, and again this suggests the importance of the amniosera in pulling the dorsal hole shut. The authors went on to directly image the F-actin levels in step mutants versus sibling embryos. The images are not very clear, and this may be one case where the original fluorescent images might be better than the inverted ones. The depressed cells at the posterior canthus are shown again, and again it is not clear what we are looking at. It might be helpful if these cells were looked at with a cortical marker that is itself not affected by dorsal closure, for example anti-phosphotyrosine. The authors hypothesize that at least some of the DC defects in step mutant embryos are due to myosin mis-regulation. The used ubiquitous expression of constitutively active MLCK to increase myosin activity and compared the phenotypes generated with those of step mutants but phenotypes differed at the LE. The authors then tried the opposite, reducing the levels of myosin heavy chain with a zip allele and assessing phenotypes with cuticle preps in a step mutant background. The results indicate some rescue of step mutant phenotypes. Interestingly as part of this analysis the authors live imaged step phenotypes with the Moe-ABD-GFP. In Figure 3E it looks like the reporter is coming on in a segmental pattern in the amnioserosa in SteKO mutants; this may be just an artefact of the way the image was cropped or could involve a segmentation gene whose stripes of expression extend around the embryo (eg. paired). Much of the rest of the manuscript is conserved with the genetic analysis of interactions between step and ena, which should provide a nice complement to cell studies. On of the more interesting results is the appearance of LE-like cells behind the LE when Step is overexpressed. It would be interesting to stain with other LE markers to how differentiated these cells are. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
|
| Revision 1 |
|
The Arf-GEF Steppke promotes F-actin accumulation, cell protrusions and tissue sealing during Drosophila dorsal closure PONE-D-20-27478R1 Dear Dr. Harris, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Sang-Chul Nam, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-20-27478R1 The Arf-GEF Steppke promotes F-actin accumulation, cell protrusions and tissue sealing during Drosophila dorsal closure Dear Dr. Harris: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Sang-Chul Nam Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .