Peer Review History
| Original SubmissionDecember 5, 2019 |
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PONE-D-19-33677 To: Efficacy of processed amaranth bread on anemia prevalence, and change in C-reactive protein adjusted ferritin and hemoglobin levels among two-to-five year-old anemic children in Southern Ethiopia: A cluster randomized controlled trial PLOS ONE Dear Mrs Orsango, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The manuscript has been evaluated by three reviewers, their comments are available below. The reviewers have raised a number of major concerns, regarding the reporting of your manuscript, statistical analysis and terminology used. For example, they have requested a possible adjustment for additional confounders and further clarification of the sample size calculation. Could you please carefully revise the manuscript to address all comments raised. We would appreciate receiving your revised manuscript by Jun 27 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Sara Fuentes Perez, PhD Staff Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. 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Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. 5. Please amend either the title on the online submission form (via Edit Submission) or the title in the manuscript so that they are identical. 6. We note you have included a table to which you do not refer in the text of your manuscript. Please ensure that you refer to Table 6 in your text; if accepted, production will need this reference to link the reader to the Table. Additional Editor Comments (if provided): [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Partly Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: No ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: Yes Reviewer #3: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: A cluster randomized controlled trial was conducted to evaluate the efficacy of amaranth bread to treat anemia in young children in Southern Ethiopia and estimate changes in C-reactive protein, hemoglobin and ferritin. Anemia prevalence was lower post-intervention in the amaranth treated arm than the control arm. Minor revisions: 1- Abstract: Provide the proportions instead of the fractions: 16/50 and 28/50. 2- Line 103: Indicate the statistical testing method which attains 90% power. State the alpha level and indicate if it was one- or two-sided. 3- Indicate the date range subjects were enrolled in the study. 4- Line 197: The chi-square test is used to compare rather than show a distribution of data. 5- Line 199: Replace the term “present” with “summarize.” 6- Line 207: Awkward wording: “was done.” 7- Line 208: Be more descriptive in this phrase, “end-line were set as anemic cases.” Consider changing end-line to last follow-up or the specific time point. 8- Line 213: Consider removing the sentence, “The repeated observation within one subject is not independent of each other.” Since this is implied by the previous sentence. 9- Line 217: Clarify if two measures were taken at baseline and another two were collected at end-line. 10- The sentence at line 218, “Consequently, a linear generalized …” seems to be redundant. 11- Line 221: Provide the rationale for selecting a matrix structure of independent. 12- Line 222: The “estimate” of the beta coefficient was reported. 13- Abstract: Clarify that the estimate of beta is reported in the abstract. 13- Line 229: The sentence beginning, “The number of boys..” is wordy making it difficult to understand. 14- Paragraph beginning at line 239: All these results can be shown in a table, and the paragraph can be made more concise. 15- All Tables: To improve clarity, consider format changes using double line spaces between the characteristics and single line spaces between the choices. Currently, it is difficult to distinguish where the results for one characteristic ends and the next one begins. 16- Paragraph beginning at line 258: Provide p-values or 95% confidence intervals to support the claim that the differences were significant. 17- Line 272: Indicate that the children who received amaranth bread had significantly higher amounts of hemoglobin which is indicated by a CI that does not contain zero. 18- Table 5: Replace “Beta coefficient” with “estimate of beta coefficient.” Reviewer #2: This study sought to evaluate the efficacy of a staple grain-based food product, rich in iron, on "anemia" in young Ethiopian children. General comment: "Anemia" simply refers to reduced HGB levels -- throughout the paper, if you're referring to iron deficiency anemia (IDA), please be clear about that. This is confusing because your paper is based on the delivery of an IRON-RICH food, which presumably would improve IRON STORES, thus reduce IDA. This food, however, would not reduce anemia due to other causes. Line 155-169: In your Methods, you define Anemia and ID separately. But what ab classification of ID? Who was anemic, without ID? Who was IDA? Who was ID, without anemia? How this was analyzed / grouped is not reported in the Statistical analysis section. Results Line 257: The prevalence of anemia is unclear given the Qs above, and this needs to be addressed throughout the remainder of the paper. The classification of ID, IDA, etc need to be made. Line 270: This is not showing an effect/impact of the Food on prevalence of ID with/w/out anemia -- these analysis need to be completed. In Table 5, you merely present effects on biochemical indicators. Why were these analyses not adjusted for inflammation? Table 6 presents adjusted Fer only and presented in a different way. But why are the Results in Table 6 not shown adjusted? Discussion: there is nothing that states acceptability of the foods consumed in this particular trial. What was compliance? FFQ Data -- what was their intake of similar foods? What was usual intake of Fe? Reviewer #3: This study compares haemoglobin and ferritin response (C reactive protein adjusted) in iron rich Amaranth compared to Maize in a bread format in anaemic (<110 g/L) children 2-5 y. Results indicate a positive benefit of the Amaranth on haemoglobin, anaemia, but not ferritin. This is an important study as Amaranth has a high yield and grows well in challenging conditions. It is rich in micronutrient for a plant-based food but is high in phytates which limit micronutrient bioavailability; this study show despite that Hb is improved. However, I have some major concerns. Comments Abstract I do think in the abstract in the objective you need to capture what you mean by processing. Amaranth grain that has been processed to reduce the effect of phytate. It is indicated later in the abstract how it was processed but it is not clear that the reason for this processing is to reduce phytates. The Betas are confusing and maybe would be better presented as an adjusted mean difference with a 95% CI. A P value should be given. I assume the B is the difference between the difference for each treatment from baseline and end line Introduction Clear and well written. What is the primary outcome? Methods The sample size seems based on the continuous variable haemoglobin not on anaemia seems like it is the primary outcome in the introduction. Has the effect of clustering been taken into consideration in the sample size? The sample size seems small for this type of study. Line 112 should g/dl preferably g/L not mg/dl Please present haemoglobin in SI units g/L not g/dl. Line 119 – what was the primary outcome Maize contains phytate although less iron was the maize processed similarly to the Amaranth? When was the blood collected at baseline relative to the start of the trial? Was there a screening (part of the larger survey) and then a baseline measure at the beginning of the trial. Why did you use a categorical cut off for ferritin adjustment rather than Thurnam or BRINDA, this would have given you more sensitivity? How was the bread dispensed? Did the children come daily to a village centre to receive the bread or was it packaged and sent home on a weekly basis? In the results section it looks Line 205 Appendix 3 is the first of the appendices to be called out in the text where is 1 and 2. Setting all individuals that had missing values at end line to anaemic is really just last value carried forward. Could you justify this? Clearly with regression to the mean and screening and including only those who were anaemic many of these would be non-anaemic at end line irrespective of treatment. I suppose one could presume this would be balanced across treatment. How were missing continuous outcome variables dealt with? Line 203 – 205 Is this used to show that there was no effect of clustering ,yet clustering is included in the GEE. In the abstract it looks like the difference of difference was used to look at treatment effects. However, it looks like baseline values were included in the model. I get a bit lost in the stats there is a baseline measure and one follow-up measure? Perhaps more clearly delineate how categorical and continuous dependent variable were dealt with. Table 2 and 3. It is not appropriate to include P-Values when comparing treatment groups because if and difference exist they must be a chance finding. I believe you have adjusted for these in the models anyway which is appropriate. Is all the information required in Table 2 and 3 necessary? It would be appropriate to include the severity of anaemia by treatment group and low ferritin by treatment group. The participants needed to anaemic at baseline (<110 g/L) for inclusion yet the mean Hb for maize is 111 g/L with the upper bound of the CI at 114 g/L. Also, the number of children is highly clustered around the cut-off 108-114 g/L. Is anaemia prevalence the correct outcome. This all leads me to believe that there was a screening and a baseline blood taken but this is not clear. Would Hb be more appropriate with a lot of people not anaemic at baseline how was dealt with in the analysis I am really confused on the ferritin. You need to adjust the ferritin values using Thurnam or Brinda and then use some sort of linear regression. Table 6 doesn’t make sense to have three cut-offs, it should be the percentage with low iron based on the appropriate cut-off for ferritin. Discussion I don’t think Amaranth would contain any B12 Line 343. Also did you consider the presence of sickle cell or other genetic Hb disorders ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: Yes: Diane M. DellaValle Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Efficacy of processed amaranth-containing bread compared to maize bread on hemoglobin, anemia and Iron deficiency anemia prevalence among two-to-five year-old anemic children in Southern Ethiopia: A cluster randomized controlled trial PONE-D-19-33677R1 Dear Dr. Orsango, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Timothy J Green Guest Editor PLOS ONE Additional Editor Comments (optional): Thank-You You have addressed the reviewers comments well. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: Thank you for addressing all comments, this is a very good addition to the literature in this area of study. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: No |
| Formally Accepted |
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PONE-D-19-33677R1 Efficacy of processed amaranth-containing bread compared to maize bread on hemoglobin, anemia and Iron deficiency anemia prevalence among two-to-five year-old anemic children in Southern Ethiopia: A cluster randomized controlled trial Dear Dr. Orsango: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Timothy J Green Guest Editor PLOS ONE |
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