Peer Review History
| Original SubmissionApril 27, 2020 |
|---|
|
PONE-D-20-12267 COVID-19 Pandemic and Farr's Law: a global comparison and prediction of outbreak acceleration and deceleration rates PLOS ONE Dear Dr. Fregni, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ACADEMIC EDITOR: This manuscripts is important and subject is relevant .Please make sure to address all comments made by reviewers, specifically the comment mentioned on the source and quality of data. I would also like to see the explicit answer to the question number 6 from the second reviewer . Please submit your revised manuscript by Jul 20 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Amir Radfar, MD,MPH,MSc,DHSc Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. We suggest you thoroughly copyedit your manuscript for language usage, spelling, and grammar. If you do not know anyone who can help you do this, you may wish to consider employing a professional scientific editing service. Whilst you may use any professional scientific editing service of your choice, PLOS has partnered with both American Journal Experts (AJE) and Editage to provide discounted services to PLOS authors. Both organizations have experience helping authors meet PLOS guidelines and can provide language editing, translation, manuscript formatting, and figure formatting to ensure your manuscript meets our submission guidelines. To take advantage of our partnership with AJE, visit the AJE website (http://learn.aje.com/plos/) for a 15% discount off AJE services. To take advantage of our partnership with Editage, visit the Editage website (www.editage.com) and enter referral code PLOSEDIT for a 15% discount off Editage services. If the PLOS editorial team finds any language issues in text that either AJE or Editage has edited, the service provider will re-edit the text for free. Upon resubmission, please provide the following: a) The name of the colleague or the details of the professional service that edited your manuscript b) A copy of your manuscript showing your changes by either highlighting them or using track changes (uploaded as a *supporting information* file) c) A clean copy of the edited manuscript (uploaded as the new *manuscript* file) 3. Please ensure that the manuscript's formatting and style are in line with PLOS ONE guidelines, please see https://journals.plos.org/plosone/s/submission-guidelines for more information. Specifically, please ensure that the information included in the introduction is relevant to the context of the study. 4. We note that Figure 2 in your submission contain map images which may be copyrighted. All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For these reasons, we cannot publish previously copyrighted maps or satellite images created using proprietary data, such as Google software (Google Maps, Street View, and Earth). For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright. We require you to either (a) present written permission from the copyright holder to publish these figures specifically under the CC BY 4.0 license, or (b) remove the figures from your submission: a) You may seek permission from the original copyright holder of Figure 2 to publish the content specifically under the CC BY 4.0 license. We recommend that you contact the original copyright holder with the Content Permission Form (http://journals.plos.org/plosone/s/file?id=7c09/content-permission-form.pdf) and the following text: “I request permission for the open-access journal PLOS ONE to publish XXX under the Creative Commons Attribution License (CCAL) CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/). Please be aware that this license allows unrestricted use and distribution, even commercially, by third parties. Please reply and provide explicit written permission to publish XXX under a CC BY license and complete the attached form.” Please upload the completed Content Permission Form or other proof of granted permissions as an "Other" file with your submission. In the figure caption of the copyrighted figure, please include the following text: “Reprinted from [ref] under a CC BY license, with permission from [name of publisher], original copyright [original copyright year].” b) If you are unable to obtain permission from the original copyright holder to publish these figures under the CC BY 4.0 license or if the copyright holder’s requirements are incompatible with the CC BY 4.0 license, please either i) remove the figure or ii) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only. The following resources for replacing copyrighted map figures may be helpful: USGS National Map Viewer (public domain): http://viewer.nationalmap.gov/viewer/ The Gateway to Astronaut Photography of Earth (public domain): http://eol.jsc.nasa.gov/sseop/clickmap/ Maps at the CIA (public domain): https://www.cia.gov/library/publications/the-world-factbook/index.html and https://www.cia.gov/library/publications/cia-maps-publications/index.html NASA Earth Observatory (public domain): http://earthobservatory.nasa.gov/ Landsat: http://landsat.visibleearth.nasa.gov/ USGS EROS (Earth Resources Observatory and Science (EROS) Center) (public domain): http://eros.usgs.gov/# Natural Earth (public domain): http://www.naturalearthdata.com/ [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Partly Reviewer #3: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Abstract: Page 8- Need expansion of COVID-19 Need a brief explanation of why Farr’s laws used in the declaration of rates? Since the generalization is not possible, region can be mentioned in the title of the paper Introduction: Please elaborate on the limitations of the Farr's law and its use in models Materials and methods: Isn’t there a need to consider the mobility of the population which has a high potential to alter the changes of cases especially in the case of infectious diseases such as COVID-19 On what criteria used to identify cases, like socio-demographic information. Under the data author need not keep the URL link of Worldometer since, It is already provided in the reference l Results: 62% from Europe, 25% from America, 6% from Asia and 6% from America-Here America is repeated twice (USA v/s rest of america, north or south, ? need to explain) If actual numbers mentioned with percentage, it would give better understanding. The cases of countries which mostly recovered from COVID can be mentioned and a comparison of the actual time of recovery and that predicted by this model can be mentioned. This can also be mentioned in the tables across to the predicted date as well as the actual date of the last case reported in that particular country. Discussion: Findings from other models, differences in the obtained findings compared to other models could be elaborated in discussion, pointing out the added value of using Farr’s law. Comparison of countries depending on age demographics, recovery time can be included in discussion. Reviewer #2: Reviewer: Dr. Farshad Farzadfar Fregni et al. provided a study to investigate Farr’s law in the COVID-19 pandemic. The authors tried to come up with an efficient model to predict acceleration and deceleration rates of the COVID-19 outbreak and probable time of outbreak relative resolution. Although the authors inspected mentioned notion well, several issues are necessary to be considered, including: 1. In the abstract, it is mentioned that COVID-19 data until April 10, 2020, is utilized for modeling, wasn’t is possible to use newer data for this study? 2. In the introduction, the authors mention that the importance of this study is to prepare the medical system against epidemics. Still, the final results of the study may implicate deceleration and endpoints of the epidemic more prominent. The main goal of the study should be highlighted. 3. Telling the life story of Mr. Farr in the introduction seems to be unnecessary for understanding the aim of this study. Besides, introducing components of Farr’s law in the introduction instead of the methods part can be more useful. 4. The first and second ratios (R1 and R2) are explained vaguely in the methods. 5. Are Worldometer website data on COVID-19 statistics reliable enough to use in such a study? Is there any previous evidence one quality of their statistics? Data quality? Different criteria for diagnosis? 6. Does the “predefined hypothesis that higher R1 and R2 ratios are correlated with higher numbers of cases or deaths” sentence has a reference? Especially about predicting deaths this claim is more questionable. 7. Data presented in S2 and S3 tablets are not consistent with prediction numbers for new cases and new deaths beyond 10th June 2020. 8. The results of the study are not well discussed in the discussion part. More detailed benefits of the results of the study could help readers more, and offer more solutions for health policymakers. 9. Numbers of countries reaching values near zero in new cases and deaths are not discussed that make how much population and talking socioeconomic status of these countries could help more. 10. The conclusion part does not conclude the main message of the study. A warning message for high-risk areas, according to predictions discussed, could be more beneficial. Reviewer #3: This is an interesting study based on the very old and forgot Farr's law. I only recommend to comment in the Discussion section the influence of the different political actions against the SARS-CoV-2, and to compare the very symmetric curve of figure 1 with the current epidemiological situation (perhaps in addendum at the lat moment). ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Giridhara R Babu, NOLITA DOLCY SALDANHA Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
|
| Revision 1 |
|
COVID-19 Pandemic and Farr's Law: a global comparison and prediction of outbreak acceleration and deceleration rates PONE-D-20-12267R1 Dear Dr. Fregni, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Amir Radfar, MD,MPH,MSc,DHSc Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed Reviewer #4: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes Reviewer #4: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes Reviewer #4: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes Reviewer #4: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes Reviewer #4: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: I appreciate the efforts of the authors for making the manuscript more suitable for publication and considering the suggested comments for revision. Here I want to discuss the answers and propose further comments: C1. I thank the authors for updating the data and doing a part of modeling on the updated data. However, I could not find the mentioned supplementary figure 3 in the attached files and links. C2. So, the main goal of the study is explained well. You can provide this answer in the introduction part to make the goal of the study clearer. C3. Thank you for removing the Farr’s biography and describing the law in the introduction. C4. Expanded explanation of the calculation of R1 and R2 ratios is a positive change, and I thank the authors. C5. Enough evidence and suitable references are provided for the validity of the Worldometer website and data. C6. The added reference for the comment and the corrected claim of authors seem to be more logical now in the context of Farr’s law. C7. The authors did well with adding an explanation to table 1 as legend and make the data and results easier to understand for readers of the article. C8. Adding the suggested parts to the discussion (as the discussion on demographic and socioeconomic status and political actions of the countries) to help health policymakers is another positive change in the manuscript made by the authors and it is respectful. C9. The revised discussion part has covered this comment. C10. A revised conclusion of the study seemed to be necessary to warn the high-risk areas, and I thank the authors for considering this comment in their manuscript. Reviewer #4: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: No Reviewer #4: No |
| Formally Accepted |
|
PONE-D-20-12267R1 COVID-19 Pandemic and Farr's Law: a global comparison and prediction of outbreak acceleration and deceleration rates Dear Dr. Fregni: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Amir Radfar Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .