Peer Review History
| Original SubmissionJanuary 6, 2020 |
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PONE-D-20-00434 The calmodulin redox sensor controls myogenesis PLOS ONE Dear Dr. Klein, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by Apr 03 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Atsushi Asakura, Ph.D Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and http://www.journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The study aimed to address the question of the role of a redox-sensitive CAM1 in aging muscle. The CRISPR-Cas9 method was used to generate a CAM1-M109Q mutant that mimicked the oxidative modification of one of 9 methonines in one or both alleles of the three expressed CaM genes in C2C12 mouse myoblast. A potentially important conclusion was that the modification of a single methione was sufficient to halt myogenesis in aging muscle. Using a skeletal muscle mouse line, the authors investigated the functional effects of a CAM mutant that mimics the oxidation of a methionine to methionine sulfoxide. By using immunofluorescence, cell proliferation and RT-PCR assays, they then showed that the mutant inhibited the expression of late myogenic factors in C2C12 cells. Overall, the cellular studies seem to have been well done, however, they are limited in scope. The study is largely correlative and is limited to one of the multiple mechanisms under the cellular control of CaM. As stated by the authors, methionine oxidation impairs the regulation of numerous target proteins. CaM mutants including the CaM-M109Q have been shown to disrupt the function of the ryanodine receptor and it is surprising that this was not addressed. Performing these experiments is strongly recommended. Second, a potential experimental limitation of CRISPR-Cas9 method is that secondary unwanted mutations are introduced, leading to the observed disruptive events. I miss a clear description of why this did not occur in the present study. Fig. 1B, show also the structure of CaM-M109Q Fig. 2 C and D and Fig. 3B , number of independent experiments should be shown. Fig. 2D in text? Reviewer #2: Manuscript Number: PONE-D-20-00434 “The calmodulin redox sensor controls myogenesis” by Klein J. et al. Skeletal muscle regeneration is largely dependent on resident muscle stem cells that are quickly activated and differentiated in response to muscle injury. However, the capacity of skeletal muscle to regenerate declines with aging. Oxidative stress is one of the central mechanisms for the blunted muscle regeneration with aging. In this manuscript, the authors focus on one of muscle redox sensors, calmodulin in C2C12 mouse myoblasts. The authors use the CRISPR-Cas9 system to induce a single amino acid substitution of calmodulin that mimics oxidation of methionine in calmodulin. Mutated calmodulin in C2C12 myoblasts negatively affects the myogenic differentiation with low late myogenic markers such as myogenin and myosin heavy chain. This is an interesting concept that describes the single amino acid substitution of calmodulin inhibits the differentiation of C2C12 myoblasts. However, there are some major considerations that should be addressed. Essential revisions: 1. The authors describe that 2A4 line contains the mutation on both alleles, on the other hand, 3C2 and 3C3 lines contain the desired mutation in only one allele. In the manuscript, the authors have concluded that all three lines are identical phenotypes. However, data about all three line is only Figure 2C (IF for myogenin). The authors should include at least one of cell lines with one allele mutation (3C2 or 3C3) in revised version of Figure 2D and Figure 3A, B. 2. Is there any evidence that mutated calmodulin in C2C12 myoblasts cannot fully function? The authors should show the data about the point, for example, the activation of CaMKII between WT vs mutant myoblasts, etc. 3. According to Figure 3A, it seems that MyoD signals in 2A4 cells are much stronger than those in WT at day 4, which make sense to me if the mutant myoblasts fail to withdraw from the cell cycle and keep proliferating (Figure 2D). However, mRNA expression of MyoD in 2A4 cells is lower than WT in Figure 3B. The contradictory result should be clarified by performing western blot (WB) analysis. In addition to this, results of Figure 3A (differentiation defect with low late myogenic factors) would be strengthened by WB, at least for Myogenin and MyHC. 4. I’m not in favor of reporting q-PCR in Figure 3B by normalizing to the day 0 condition. It is better to compare the expression of each gene between WT vs 2A4 at day 4. I recommend that the authors include either 3C2 or 3C3 lines containing the one allele mutation in the revised figure as I mentioned above. 5. H2O2 treatment inhibits the myogenic differentiation according to Figure 2B, does this condition induce the oxidation of methionine in calmodulin? The author should clarify this point. 6. The mutated myoblasts proliferate faster than WT myoblast in both GM and DM conditions as shown in Figure 2D. Does H2O2 treatment also increase the proliferation of C2C12 myoblasts? 7. Which results support the Figure 4A and 4B? I think none of these data described in this manuscript support Figure 4A and 4B. The data described in this paper could only lead a conclusion that the single amino acid mutation in muscle redox sensor calmodulin fails to withdraw the cell cycle and directly/indirectly suppresses the late myogenic factors such as myogenin. If the authors want to support the conclusion as shown in Figure 4A-B, the authors should perform to investigate the transcriptional activity of these genes by luciferase assay in the proper condition. I recommend that the authors delete and replace it with another graphical summary which explains what you found in this study. Minor points: 8. Page 11, “The calmodulin redox sensor halts myogenesis”, the authors should check the numerical order of Figure 2. There are a lot of mislabeling. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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The calmodulin redox sensor controls myogenesis PONE-D-20-00434R1 Dear Dr. Klein, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Atsushi Asakura, Ph.D Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: There are no comments for the authors. There are no comments for the auithors. There are no comments for the authors. how many characters are needed? Reviewer #2: I have read with interest the revised version of the manuscript, which has been improved by the additional requested evidence. I therefore recommend publication on PLOS ONE. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No |
| Formally Accepted |
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PONE-D-20-00434R1 The calmodulin redox sensor controls myogenesis Dear Dr. Klein: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Atsushi Asakura Academic Editor PLOS ONE |
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