Peer Review History

Original SubmissionMarch 12, 2020
Decision Letter - Kyung-Jin Min, Editor

PONE-D-20-07154

Quercetin enhances motility in aged and heat-stressed Caenorhabditis elegans by modulating HSF-1 activity and insulin-like and p38-MAPK signaling

PLOS ONE

Dear Dr. Sakamoto,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

We would appreciate receiving your revised manuscript by May 30 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter.

To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). This letter should be uploaded as separate file and labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. This file should be uploaded as separate file and labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. This file should be uploaded as separate file and labeled 'Manuscript'.

Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

We look forward to receiving your revised manuscript.

Kind regards,

Kyung-Jin Min

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

1. Thank you for including your funding statement within the acknowledgements section of your manuscript; "This work was supported in part by Grants-in-Aid for Scientific Research and Education from the University of Tsukuba, Japan. We appreciate Suntory Global Innovation Center Limited for their partial support."

We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form.

Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows:

"NO - Include this sentence at the end of your statement: The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Partly

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: 1. Line 69: Please delete the word of“signaling”at the period

2. Please describe in detail of OP or Q plates

3. Please point the detail concentration of OP and O in each experiment

4. Line 224-227: the authors showed that the heat stress disrupts nematode proteostasis by causing aberrant protein folding and aggregation in a manner similar to aging, so the motility of heat-stressed worms is considered to be equivalent to that of aged worms, and to be representative of the nematode healthspan. Please list related references

5. It is recommended offer the data of the positive control in each experiment

Reviewer #2: Obtained data on quercetin are not consistent with the results of other model studies (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5179547/) and there is not enough discussion of the reasons for such differences.

Only one house-keeping gene as a reference in RT-PCR, but actine has age-related changes in its expression. It is better to try 2-3 different house-keeping genes.

The authors have to carefully check the style. For example the word "modulate" used 4 times in the abstract.

In a row 69: signaling [4,14-16]. signaling

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step.

Revision 1

Replies to reviewers' comments:

*All corrections are shown in red in the text.

Reviewer #1

1. Line 69: Please delete the word of “signaling” at the period

<Reply 1>

We appreciate to the reviewers’ comment. Following the reviewers’ suggestion, we deleted the word of “signaling”

See -� P4, L69

2. Please describe in detail of OP or Q plates

<Reply 2>

OP plate and Q plate are the plates coated with E. coli (OP50) and quercetin (50µl, 500µl), respectively, onto a NGM plate as written in Materials and methods.

See -� P5, L80

3. Please point the detail concentration of OP and O in each experiment

<Reply 3>

Basically we used the concentration 50µl and 500µl only. We described the concentration in Materials and methods.

See -� P7, L96 and 107, P8, L122, P9, L134 and 142, P10, L150

4. Line 224-227: the authors showed that the heat stress disrupts nematode proteostasis by causing aberrant protein folding and aggregation in a manner similar to aging, so the motility of heat-stressed worms is considered to be equivalent to that of aged worms, and to be representative of the nematode healthspan. Please list related references

<Reply 4>

We appreciate to the reviewers’ comment. Following the reviewers’ suggestion, we inserted two references [33, 34].

[33] Ravi Raghav Sonani. et al. Phycoerythrin extends life span and health span of Caenorhabditis elegans.

Age (Dordr). 2014;36(5):9717. doi: 10.1007/s11357-014-9717-1.

[34] Philippe Verbeke, et al. Heat Shock Response and Ageing: Mechanisms and Applications.

Cell Biology International 2001, Vol. 25, No. 9, 845–857.

See -� P15, L239

5. It is recommended offer the data of the positive control in each experiment

<Reply 5>

We appreciate to the reviewers’ comment. Following the reviewers’ suggestion, we inserted one reference [5] and supplemental data using EGCG, as a positive control.

[5] Zhang, L. et al. Significant longevity-extending effects of EGCG on Caenorhabditis elegans under stress. Free Radical Biology and Medicine, 46(3), 414-421 (2009).

See -� P3, L42, P12, L185, P13, L202, P15, L241 and in supplemental data

Reviewer #2

Obtained data on quercetin are not consistent with the results of other model studies (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5179547/) and there is not enough discussion of the reasons for such differences.

<Reply 1>

As written in the previous paper [13], low concentration of quercetin has positive effects, whereas high concentration has negative effects. The effects on aging phenotypes might be different depending on the concentration of quercetin and animals to apply.

[13] Proshkina, E. et al. Geroprotective and Radioprotective Activity of Quercetin, (-)-Epicatechin, and Ibuprofen in Drosophila melanogaster. Front. Pharmacol. 7, 505 (2016).

See -� P3, L46

Only one house-keeping gene as a reference in RT-PCR, but actin has age-related changes in its expression. It is better to try 2-3 different house-keeping genes.

<Reply 2>

We performed qPCR assay using tba-1 and pmp-3 as the reference genes recommended in a paper [31], and inserted these data and one reference [31] into text. Actin could be a proper reference gene because the quantity of mRNA expression of actin, tba-1 and pmp-3 didn’t change significantly.

[31] Zhang, Y et al. Selection of reliable reference genes in Caenorhabditis elegans for analysis of nanotoxicity. PloS one 7.3 (2012): e31849.

See -� P10, L156, P14, L219 and in supplemental data

The authors have to carefully check the style. For example the word "modulate" used 4 times in the abstract.

In a row 69: signaling [4,14-16]. Signaling

<Reply 3>

We appreciate to the reviewers’ comment. Following the reviewers’ suggestion, we replaced the words “modulate” and “signalling” to some others or removed and abbreviate insulin-like signaling as ILS.

See -� P2, L28-35, P4, L68, P5, Table1, P16, L250, 256-259, P17, L271 and

273 and P19, L305

Attachments
Attachment
Submitted filename: Replies to reviewers-QCN-TS-Final.docx
Decision Letter - Kyung-Jin Min, Editor

Quercetin enhances motility in aged and heat-stressed Caenorhabditis elegans nematodes by modulating both HSF-1 activity, and insulin-like and p38-MAPK signalling

PONE-D-20-07154R1

Dear Dr. Sakamoto,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Kyung-Jin Min

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #3: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #3: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #3: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #3: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #3: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This paper deals with the movement ability of Quercetin enhances heat-stressed in C. elegans. The subject and contents are I think good for this journal.

Reviewer #3: (No Response)

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #3: Yes: Kyung-Jin Min

Formally Accepted
Acceptance Letter - Kyung-Jin Min, Editor

PONE-D-20-07154R1

Quercetin enhances motility in aged and heat-stressed Caenorhabditis elegans nematodes by modulating both HSF-1 activity, and insulin-like and p38-MAPK signalling

Dear Dr. Sakamoto:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr Kyung-Jin Min

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .