Peer Review History
| Original SubmissionFebruary 20, 2020 |
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PONE-D-20-04950 3D culture of functional human iPSC-derived hepatocytes using a core-shell microfiber PLOS ONE Dear Prof. Takeuchi, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by May 15 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Hiroaki Onoe Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements: 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.plosone.org/attachments/PLOSOne_formatting_sample_main_body.pdf and http://www.plosone.org/attachments/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. Thank you for stating the following in the Competing Interests section: "The authors declare competing financial interests: ST is a inventor on intellectual property rights related to the cell fibre technology, and stockholders of Cellfiber Inc, a start-up company based on the cell fibre technology." We note that one or more of the authors are employed by a commercial company: Cellfiber Inc. 1. Please provide an amended Funding Statement declaring this commercial affiliation, as well as a statement regarding the Role of Funders in your study. If the funding organization did not play a role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript and only provided financial support in the form of authors' salaries and/or research materials, please review your statements relating to the author contributions, and ensure you have specifically and accurately indicated the role(s) that these authors had in your study. You can update author roles in the Author Contributions section of the online submission form. Please also include the following statement within your amended Funding Statement. “The funder provided support in the form of salaries for authors [insert relevant initials], but did not have any additional role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. The specific roles of these authors are articulated in the ‘author contributions’ section.” If your commercial affiliation did play a role in your study, please state and explain this role within your updated Funding Statement. 2. Please also provide an updated Competing Interests Statement declaring this commercial affiliation along with any other relevant declarations relating to employment, consultancy, patents, products in development, or marketed products, etc. Within your Competing Interests Statement, please confirm that this commercial affiliation does not alter your adherence to all PLOS ONE policies on sharing data and materials by including the following statement: "This does not alter our adherence to PLOS ONE policies on sharing data and materials.” (as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests) . If this adherence statement is not accurate and there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared. Please include both an updated Funding Statement and Competing Interests Statement in your cover letter. We will change the online submission form on your behalf. Please know it is PLOS ONE policy for corresponding authors to declare, on behalf of all authors, all potential competing interests for the purposes of transparency. PLOS defines a competing interest as anything that interferes with, or could reasonably be perceived as interfering with, the full and objective presentation, peer review, editorial decision-making, or publication of research or non-research articles submitted to one of the journals. Competing interests can be financial or non-financial, professional, or personal. Competing interests can arise in relationship to an organization or another person. Please follow this link to our website for more details on competing interests: http://journals.plos.org/plosone/s/competing-interests 3. We note that you have a patent relating to material pertinent to this article. Please provide an amended statement of Competing Interests to declare this patent (with details including name and number), along with any other relevant declarations relating to employment, consultancy, patents, products in development or modified products etc. Please confirm that this does not alter your adherence to all PLOS ONE policies on sharing data and materials, as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests by including the following statement: "This does not alter our adherence to PLOS ONE policies on sharing data and materials.” If there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared. This information should be included in your cover letter; we will change the online submission form on your behalf. Please know it is PLOS ONE policy for corresponding authors to declare, on behalf of all authors, all potential competing interests for the purposes of transparency. PLOS defines a competing interest as anything that interferes with, or could reasonably be perceived as interfering with, the full and objective presentation, peer review, editorial decision-making, or publication of research or non-research articles submitted to one of the journals. Competing interests can be financial or non-financial, professional, or personal. Competing interests can arise in relationship to an organization or another person. Please follow this link to our website for more details on competing interests: http://journals.plos.org/plosone/s/competing-interests [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Partly Reviewer #3: Yes Reviewer #4: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors reported a novel cultivation method of Human iPSC-hepatocytes with a fiber-shaped 3D scaffold. They encapsulated hepatocytes into the core of core-shell hydrogel fibers to achieve both a 3D ECM-rich environment and easy manipulation. The approach is interesting and they showed that the protein secretion and gene expression increase compare to 2D or spheroid culture. However, the results are a bit unclear because the manuscript lacks some information or experiments as follows: 1. For line 185 and Fig. 3B, there is a contradiction in the culture time until evaluating the albumin secretion (The manuscript is written as day 3 & 7, while the figure is shown as day 3 & 6). They need to be corrected. 2. In Fig. 3C, 4A, 4B, and S4, the authors compared the gene expression of hepatocytes. However, there is no description of the normalization of cell numbers. Since the number of cells affects to the amount of expression, the results should be normalized for comparison. The description should be added. If the results are not the normalized one, they should be revised. 3. In Fig. 5C and lines 276-280, the authors indicated that the concentration of albumin increases by transplantation of fibers compared to the non-transplanted case. However, since the purpose of the authors is to increase the cell function by their culture method, the effect should be compared not with the non-transplanted case but with the previous culture methods (e.g. spheroids). Reviewer #2: Takeuchi and co-workers reported a culture system for human iPSC-derived hepatocyte-like cells using the core-shell microfibers. The authors compared the cell functions between the fiber and conventional 2D culture conditions, and claimed that the presented approach was effective. In addition, the authors perform in vivo experiments to show the applicability of the fiber to transplantation therapy. In general, organization of individual cells into 3D platforms is a good strategy to maximize the cell functions, and the presented paper is interesting as one of new approaches. However, following points should be properly explained and/or reflected before publication of this paper in this journal. (1) It was unclear why the authors obtained good results when they encapsulated cells in the fiber, because there is no rational explanation for this point. There should be some important cell-cell and cell-matrix interactions in 3D formats that potentially enhanced cell functions, with proper signal transductions. These points, especially from the viewpoint of the molecular signalings, should be properly explained. (2) The results of the animal study were not so convincing, because the authors did not mention the effectiveness of the fiber-based cell encapsulation and transplantation. Many researchers have transplanted cells (hepatocytes) that were encapsulated in hydrogel matrices, but the comparison with conventional strategies was not described at all in this paper. The reason for choosing the abdominal cavity as the transplantation site is also unclear; the liver itself, the kidney capsule, or subcutaneous site would be superior because of the presence of the blood flow. The blood concentration of human albumin might not be sufficiently high considering the number of the transplanted cells; I am wondering the cell viability. It was unclear what types of liver diseases could be improved by this approach, especially for humans. These points should be clarified. (3) It was unclear why the authors used Matrigel as the matrix, instead of collagen, the gold-standard for hepatocyte culture. (4) Some of the experimental conditions were not properly described. For example, following points are unclear: (i) the housekeeping gene used for qPCR, (ii) the age of the animal, and (iii) how many times the authors repeated the experiments, especially for the figures. (5) The manuscript contains many typos and unnatural expressions. The entire manuscript should be thoroughly checked once again before submitting the revision. Reviewer #3: This manuscript presents the 3D culture technique of human iPSC-derived hepatocytes using a core-shell microfiber. The core-shell microfiber is a unique, superior 3D culture platform that provides an ECM-abundant core and a mechanically-strong shell. The authors proved the potential of their original core-shell fibers for cell transplantation applications. The manuscript would seem of considerable interest to those working in tissue engineering and regenerative medicines. However, the authors should describe the differences with their previous publication in IEEE MEMS 2020 titled “3D hepatic tissue formed by iPSC-derived hepatocytes using a cell fiber technology.” Figure 1 includes the exactly same figures in Figure 3 of the previous publication. After polished based on the aforementioned critiques, this manuscript may be able to be published in PLOS ONE. I would recommend that this paper needs minor revision to be published in PLOS ONE. Reviewer #4: Nagata et al. apply cell fiber biofabrication techniques to create core-shell fibers of human iPSC-derived hepatocytes and perform in vitro and in vivo characterizations, including transplantation in a mouse model. Overall, the work is thorough; however, there are several aspects that should be expanded before publication. First, the introduction is missing a lot of prior work on cell fibers. The state of the art should be discussed in more detail (e.g., which cells have been demonstrated as compatible with the cell fiber approach, why haven't human iPSC-derived hepatocytes been done before, etc.). Such discussion on how this work is different from prior developments is important. I think a figure and supplementary movie featuring the biofabrication process is needed. Fabrication results are included in Fig. 2, but that figure should be expanded with the fabrication setup and process, which will be helpful for the readership. Also, the conclusion reads like a quick summary, but conclusions should really be used to provide some deeper insights into the study. There are some other minor notes, like the format of randomly including the figure captions in the main text being difficult for the reviewers and some weird callouts to the suppl. figures (S2A Fig). Overall though, should the aforementioned changes be made, my recommendation is for the manuscript to be accepted. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No Reviewer #4: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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3D culture of functional human iPSC-derived hepatocytes using a core-shell microfiber PONE-D-20-04950R1 Dear Dr. Takeuchi, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, Hiroaki Onoe Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed Reviewer #3: All comments have been addressed Reviewer #4: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: (No Response) ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: (No Response) ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes Reviewer #4: (No Response) ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Authors have properly addressed my concerns in the revision, and I agree to their explanations. I have no more concerns on this article. Reviewer #2: The revised manuscript by Takeuchi and co-workers properly reflected most of my previous concerns, and now the paper was improved. This paper is a nice example of the hydrogel fiber-based cell culture technique, and hence, I recommned accepting this paper for publication. Reviewer #3: The authors replied to the reviewers' comments well and improved the manuscript. I recommend the manuscript for publication. Reviewer #4: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No Reviewer #4: No |
| Formally Accepted |
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PONE-D-20-04950R1 3D culture of functional human iPSC-derived hepatocytes using a core-shell microfiber Dear Dr. Takeuchi: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Hiroaki Onoe Academic Editor PLOS ONE |
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