Peer Review History
| Original SubmissionFebruary 28, 2020 |
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PONE-D-20-05889 Determination of piperaquine concentration in human plasma and the correlation of capillary versus venous plasma concentrations PLOS ONE Dear Dr Huang, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has some merit but does not meet PLOS ONE’s publication criteria as it currently stands. In particular, the expert reviewer has major concerns about the fact that the authors cannot justify the absence of carry-over in their method by showing additional results (see reviewer's requests in the comments to the author), Consequently the statements and conclusions in the manuscript are not sufficiently supported by the results. If this can not be appropriately addressed in a revision we will move to rejection of the manuscript. We now invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by Apr 24 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Henk D. F. H. Schallig, Ph.D Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements: 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.plosone.org/attachments/PLOSOne_formatting_sample_main_body.pdf and http://www.plosone.org/attachments/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. In your Methods section, please provide additional information about the participant recruitment method. Please ensure you have provided sufficient details to replicate the analyses such as: a) the recruitment date range (month and year), b) a description of any inclusion/exclusion criteria that were applied to participant recruitment, and c) a description of how participants were recruited. 3. We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors describe a novel chromatography method to separate and eventually quantify piperaquine in human plasma, plus an additional comparison of venous plasma concentrations versus capillary plasma concentrations. Regarding the detection method, at least 5 other piperquine methods have been described in the literature, and also the comparison of venous versus capillary concentrations has extensively been described, I believe one of the first papers was in 2010 from Lindegardh's group. The authors propose that the method described here is the first method that does not exhibit carry-over, a characteristic which is present for piperaquine given its high adsorbance to a variety of surfaces. However, the authors appear to describe two methods in the current paper, a novel one with a new chromatography and a range of 10-1000 ng/mL, and an older one, previously published in 2014, with a range of 0.5-50 ng/mL. This is actually very unclear in the manuscript, LLOQ's are constantly being mixed up and also the methodology only appears to describe the method of 10-1000 ng/mL, while little details are given regarding the method of 0.5-50 ng/mL. I have a few major queries and comments: (1) The main point of the new method (10-1000 ng/mL) appears to be the avoidance of carry-over, apparently achieved according to the authors, by the new chromatography. Carry-over can be easily avoided by injecting blank samples after a high concentrations. The only benefit of avoiding carry-over would be that the order of measuring samples does not need to be accounted for, which would be an added benefit. However, the another second method was used by the authors, using a more sensitive machine (API5000 instead of API2000) to measure the low concentrations, which was actually previously published already (but then with an LLOQ of 1.5 ng/mL). Th application of this second method for concentrations in the lowest range still requires the analyst to know which samples contain which concentrations, to know which samples should be measured at which machine. This means that all lower concentrations are not even measured with the method, in the same assay, as any of the higher concentrations, and thus the added value of having no carry-over in the method with the 10-1000 ng/mL is, in my opinion, absent. (2) Perhaps more importantly, I have the impression that the absence of noticing a carry-over with the new method (10-1000 ng/mL) is an artefact of the methodology used and the high limit of quantification of this method. Actually, as the authors showed in their previous publication on piperquine LCMSMS analysis from 2014 in Bioanalysis, the carry-over after an ULOQ using the method that they used for quantifying the concentration range of 0.5-50 ng/mL, was only 0.2 ng/mL. This means that the LLOQ of the new method (10 ng/mL) is about 50 times the signal of the carry-over. Given that the API2000 is a much less sensitive machine and the high LLOQ with this method, I simply assume that a carry-over of maximally 0.2 ng/mL is simply not visible with this unsensitive methodology. I would be happy to see my statements corrected by any additional evidence provided by the authors, but based on what currently is provided the statement that carry-over is absent with the new chromatography is not supported by the results. (3) More details are needed regarding the origin and quality of chemicals. Moreover, I suggest the authors to adhere to the international bioanalytical validation requirements as issued by FDA and/or EMA. (4) The ULOQ seems to be high for the encountered concentrations in the clinical samples (maximally 250-300 ng/mL), why and how was chosen for this calibration range? (5) Differences between venous and capillary plasma concentrations have previously been published, however these are not well discussed in the current discussion. (6) The authors suggest a linear relationship between venous and capillary plasma concentrations. The fit of this relationship appears to be far from optimal and extrapolation of venous concentrations from capillary concentrations appears difficult, the manuscript would benefit if the authors could acknowledge this limitation and discuss its impact. (7) Regarding this linear relationship between venous and capillary concentrations: the authors state in the discussion: "This is probably due to the complex PK profile of PQ, such as multiple peak concentrations and slow distribution of PQ requiring longer time to reach equilibrium." If this would be the case a linear relationship over the whole concentration range seems physiologically not correct, the manuscript would benefit if the authors could consider and discuss this. (8) Ethics: the registration numbers relating to approval by any of the ethical/institutional review boards should preferably be included in the manuscript for full ethical transparency. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-20-05889R1 Determination of piperaquine concentration in human plasma and the correlation of capillary versus venous plasma concentrations PLOS ONE Dear Dr Huang, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. The expert reviewer has assessed your revised manuscript. Unfortunately, you did not address or meet all the required revisions requested by the reviewer. You have now the oportunity to correct this further. We want to receive a clear response to the issues raised by the reviewer and you must address all points raised. We would appreciate receiving your revised manuscript by Jun 14 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Henk D. F. H. Schallig, Ph.D Academic Editor PLOS ONE [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I thank the authors for their revisions. I have a few more comments, the numbering below refers to my original comments and the authors' replies to these points: (2) I believe the authors acknowledge my observation regarding the lower sensitivity of the equipment which is probably the reason for not observing the carry-over, instead of the adjusted chromatography. The authors suggest that carry-over would amount to 0.8 ng/mL for a 1000 ng/mL sample, this would indeed mean that carry-over remains undetected with the method with LLOQ of 10 ng/mL, but nevertheless might still be present. This needs to be clearly acknowledged in the manuscript as the authors still suggest now throughout the manuscript that carry-over is avoided due to the new chromatography method, a statement which I do not see supported by any data. (6) This statement regarding the ratio between plasma and venous samples would benefit from mentioning some quantification about the variability, e.g. an easy way to illustrate the level of variability would be mentioning the range/IQR of the quantified ratio's for each paired sample set. Please also remove the word 'interindividual' as the variability is not due to variability between patients, but rather between sample time points (at least this is what the authors suggest). (7) I assume the authors intended here 'linear correlation' and not just 'correlation'. Additionally, correlation might be better assessed during steady-state of the pharmacokinetics. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Determination of piperaquine concentration in human plasma and the correlation of capillary versus venous plasma concentrations PONE-D-20-05889R2 Dear Dr. Huang, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, Henk D. F. H. Schallig, Ph.D Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No |
| Formally Accepted |
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PONE-D-20-05889R2 Determination of piperaquine concentration in human plasma and the correlation of capillary versus venous plasma concentrations Dear Dr. Huang: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Henk D. F. H. Schallig Academic Editor PLOS ONE |
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