Peer Review History
| Original SubmissionDecember 31, 2019 |
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PONE-D-19-35853 Cornea verticillata and acroparesthesia efficiently discriminate clusters of severity in Fabry disease PLOS ONE Dear Dr MAUHIN, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by May 08 2020 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
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If your ethics statement is written in any section besides the Methods, please move it to the Methods section and delete it from any other section. Please also ensure that your ethics statement is included in your manuscript, as the ethics section of your online submission will not be published alongside your manuscript. 5. Thank you for stating the following in the Competing Interests section: "WM received honoraria, congress fees and travel assistance from Shire-Takeda, Amicus and Sanofi-Genzyme. FLam has received travel support from Amicus Therapeutics., Shire and Sanofi-Genzyme. He received lecture fees from Actelion Pharmaceuticals. OL has received travel support and lecture fees from Amicus Therapeutics, Shire, and Sanofi-Genzyme. DL has received honoraria and travel assistance from Sanofi-Genzyme and has participated on boards with Amicus. HM received honoraria and travel assistance from Sanofi-Genzyme and Amicus and has participated on boards with Amicus and Shire. BD has received honoraria from Amicus (member of the scientific board) and Novartis (lectures) and travel fees from Genzyme-Sanofi. VLS has received travel fees and accommodations from Shire and Sanofi-Genzyme. EN has received travel fees from Shire and Sanofi-Genzyme and an honorarium from Amicus. AM has received travel fees and accommodations from Shire, Sanofi-Genzyme and Amicus. CC has received consultant honoraria and congress fees from Biomarin and Sanofi-Genzyme and has participated in editorial activity with Takeda-Shire. TZ has received congress fees and travel assistance from Sanofi-Genzyme. FM has received honoraria from Shire and travel assistance from Sanofi-Genzyme. CL has received honoraria from Sanofi-Genzyme and travel assistance from Sanofi-Genzyme and Shire. CD has received travel assistance from Shire, Sanofi-Genzyme, Sobi, Orphan Europe, Nutricia, Lucane Pharma, Amicus, and Ultragenyx and honoraria from Amicus and has participated on boards with Ultragenyx and Sanofi. GB has received travel assistance from Shire, Genzyme-Sanofi and Amicus. OB, AD, PDH, KHL, FLab, MM, CM, and MW declare no conflict of interest." Please confirm that this does not alter your adherence to all PLOS ONE policies on sharing data and materials, by including the following statement: "This does not alter our adherence to PLOS ONE policies on sharing data and materials.” (as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests). If there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared. 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Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Many thanks for submitting the manuscript PONE-D-19-35853 for review. The authors Mauhin and colleagues present an informative study that aims to clinically classify Fabry patients. The authors develop a new scoring system to classify FD patients and conclude that acral pain (experienced in the past or presence) and cornea verticillata suffice to discriminate classical from nonclassical FD patients. The strength of the study lies in the very well documented patient cohort of 104 male and female FD patients from various centers in France. The evaluations and statistical tests used are, in the opinion of this reviewer, correctly chosen. Nevertheless, I think that the study is quite ambitious and in the current version confusing at times. I will specify my criticism in the following points so that the authors can make changes if necessary, because I think that clarity needs to be improved in order to reach a broader readership. Major points: 1. Abstract: In general, and this should perhaps be addressed in the abstract, I am unsure about the message and merit of the study. In the abstract the "methods" describe very briefly the statistical evaluation. Would it not be more appropriate to mention the approach of introducing a new score to validate the patient clusters obtained. I think that would summarize the article better. Is a completely new score even suitable to validate the clusters? Or would you maybe call it a “comparison”. As I said I am quite unsure what to do with this approach even though I think it is interesting. Since you use also the approved MSSI score for "validation" or correlation of the data (Table 3), maybe this can be named here as well. Since this should be described in more detail, the incredibly detailed "Results" section could then be shortened by a few of the given numbers and only mention general findings. Detailed results should then be named in the actual results section. 2. Introduction: A further question of understanding arises from the last sentence of the introduction, page 7, lines 122-ff. How do the authors transmit from the clinical clustering to the FFABRY score? What is the relationship between the score, as strangely enough introduced in the results section starting on page 13, and the clustering data shown above (Figures 1 and 2)? If I understand it correctly, clustering is being conducted qualitatively, binary, yes/no, but the score suddenly comes up with 6 K-classes for kidney disease, 5 H classes for heart disease and 3 N classes for neurological involvement. Of course I understand the introduction of a scoring system that is as precise as possible. The scores of the parameters are added to form a total score, but how does this fit to the clustering approach into basically 2(!) patient groups (or 3, if I consider the females) introduced before? I feel a logical disruption here, 2 different subjects being mixed up. The score results from the existing patient data and the clustering also, but should the score result from the clustering data either? That connection is missing, especially since all 54 male individuals obtain an FFABRY score, but were not used for the clustering. The title of Table 2 states: “Characteristics of patients stratified by clinical phenotype defined with the FFABRY scoring system.” If the FFABRY score is exclusively used to classify the patients, there should not be an overlap in FFABRY scores in the classical and nonclassical group. In this case, I think it is better to indicate the min-max than the IQR, because IQR confusingly suggests an intersection of the groups. 3. Results: About the clustering criteria. If I understand this correctly, each criterion can be answered in binary form. Acral pain/no acral pain, CV/no CV and so on. Since it is mentioned in the text as a distinguishing criterion for the nonclassical group 1 (line 182) I searched for "no missense mutation" or similar in figure 1a, but I did not find it. Maybe it helps to sum up all criteria in a table. 4. Results: Table 3 contains a lot of information, but is hardly mentioned or explained in the text. You just state (page 18, line 300-f.): “Clustering appeared clinically relevant using both MSSI and FFABRY scores, with significant differences between groups stratified by classes of ages (table 3).“ However, the statistical assessment was carried out between the 3 groups classical, nonclassical and female. Here is the question, what do we learn from this? Statistical significance rarely seems to be the case here. If age is a significant factor, then surely statistics should have been displayed between age groups within each patient group? That confuses me a bit? 5. Discussion: I would be interested how many patients in this cohort were initially classified as classical before the score was applied? Did the score obtained match the original assessment? In this regard it is important to note whether the physical examinations for the renal, cardiac and neurological parameters have been performed by the same physician in all 104 patients? And was the MSSI score taken as a basis? As you write, it is subject to a certain amount of subjectivity. 6. Discussion: I am unsure about this point (it relates to point 5 above), but are the numerical thresholds used for the FFABRY score objective? As can be seen from the biomarker, patients with higher lyso-Gb3 levels are not necessarily more severely affected. In other words, how objectively can one say that a patient with 60 < eGFR ≤ 90 ml/min/1.73 m² is less severely affected than a patient with 30 < eGFR ≤ 60 ml/min/1.73 m²? This should also be discussed I think. In the end, the overall condition of the patient always tells us how severely he/she is affected or am I wrong? 7. Discussion: What is the overall benefit to use the Score developed in this study? Maybe you could give examples to clarify this. I give an example: A study that discovers a missense mutation that is amenable to chaperone therapy has a direct impact on a patient with such mutation. The clinical phenotype of the patient plays a minor role. The main indicator is the knowledge about the genetics of the patient. I mean, certainly in nonclassical cases a decision on therapy will be approached more cautiously than in classical cases, where the start of therapy must not be delayed. But does this study contribute anything to that? Don't get me wrong, I think the new score is very informative and objectifies the issue somehow, maybe it should be mentioned in the title of the study? But as you write, there is hardly a novelty in the finding that CV discriminates the Fabry patient groups, I quote from the article (page 23, line 350-ff.): "Although CV can be related to exposure to amiodarone, its association with the severity of FD has already been described, as observed in 94% of classical Fabry cases (22)". In other words, isn´t there any evidence that the classification can be helpful in therapy decisions as to start an ERT or PCT for example? This topic should be discussed. 8. Figures: Basically all figures, but especially Figure 4 require strong editing. The statements made cannot be reconstructed at all on the basis of the figure, as the caption is not legible. The legend for Figure 4 does not provide much information either. I would recommend the use of panel "A", "B", and "C" for renal, cardiac, and neurological. Do the numbers in Figure 3 have a meaning? They are not readable. Do they denote patient IDs as in Figure 1b? Figure 5 reads the French term "Linéaire". This should be translated into English. Minor points: Page 4, l. 75: GLA gene should be written in italics (holds true throughout the text) Page 6, l. 106-ff.: The sentence on page 6, starting at line 106 reports 3 recent newborn studies. First, the references for the low incidence should be placed after "live births [3,4],..." and the references [5-7] should be placed as is. However, the authors omit a fourth study by Wittmann and colleagues (JIMD Rep. 2012;6:117-25. doi: 10.1007/8904_2012_130.), which reaches a similar result in a newborn study in Hungary and should also be cited here. Page 12, line 177-ff.: It is not indicated whether the 41 subjects for this analysis also included untreated patients. Apart from the split between the sexes, I consider this to be an essential point to consider. Even though this following statement is made on page 24, line 368-ff.: “As experts managing lysosomal diseases in a dedicated tertiary center, we assume that treatment with ERT or chaperone therapy has not modified the overall natural history of the disease or the prognosis of patients. Nonetheless, to the best of our knowledge, regression but no disappearance of CV has ever been reported (25)." This must be introduced directly at this point, as it otherwise contributes to the confusing structure of the article. Page 16, line 267: Should not the 41 males and 36 females with complete data be used for this analysis? Would the result change? Page 23, line 366-ff. and page 24, line 371-ff. Redundant information is given. Reviewer #2: The manuscript Cornea verticillata and acroparesthesia efficiently discriminate clusters of severity in Fabry disease by Wladimir MAUHIN and coworkers, concerns with Fabry disease and specifically with the search for “a simple and clinically relavent way to classify patients according to their disease severity”. Overall, the manuscript is well organized and described. I think that it deserves to be published. I would suggest few minor revisions. 1 Line 100-102: The authors state: “Fabry disease (FD; OMIM #301 500) is an X-linked lysosomal storage disease caused by an enzymatic defect of the hydrolase alpha-galactosidase A (AGAL-A), resulting in the accumulation of glycosphingolipids, mainly globotriaosylceramide (Gb3) (1)”. Please shortly cite and discuss LysoGb3. Despite the fact that Gb3 accumulates, LysoGb3 is the biomarker usually measured, in fact the authors show and discuss results concerning LysoGb3 (for example see the paragraph “LysoGb3 plasma levels, anti-agalsidase antibodies and FFABRY” and table2). The following references could be useful: Smid, B.E.; van der Tol, L.; Biegstraaten, M.; Linthorst, G.E.; Hollak, C.E.; Poorthuis, B.J. Plasma globotriaosylsphingosine in relation to phenotypes of Fabry disease. J. Med. Genet. 2015, 52, 262–268. Young-Gqamana, B.; Brignol, N.; Chang, H.H.; Khanna, R.; Soska, R.; Fuller, M.; Sitaraman, S.A.;Germain, D.P.; Giugliani, R.; Hughes, D.A.; et al. Migalastat hcl reduces globotriaosylsphingosine (lyso-Gb3) in Fabry transgenic mice and in the plasma of Fabry patients. PLoS ONE 2013, 8, e57631 2 Lines 119-120. The authors state: “As the prognosis of the different phenotypes is markedly different, there is a need to determine reproducible classification criteria to improve the reliability of therapeutic studies and to personalize the bedside management of FD. Some scoring systems already exist, and they have been elaborated with empirical considerations; these scoring systems include many nonobjective criteria with several items that make them difficult to use in a daily practice”. It would be useful to introduce some references. For example: Fabry disease revisited: Management and treatment recommendations for adult patients. Ortiz A, Germain DP, Desnick RJ, Politei J, Mauer M, Burlina A, Eng C, Hopkin RJ, Laney D, Linhart A, Waldek S, Wallace E, Weidemann F, Wilcox WR. Mol Genet Metab. 2018 Apr;123(4):416-427. doi: 0.1016/j.ymgme.2018.02.014. Epub 2018 Feb 28. Review. The Large Phenotypic Spectrum of Fabry Disease Requires Graduated Diagnosis and Personalized Therapy: A Meta-Analysis Can Help to Differentiate Missense Mutations. Citro V, Cammisa M, Liguori L, Cimmaruta C, Lukas J, Cubellis MV, Andreotti G. Int J Mol Sci. 2016 Dec 1;17(12). pii: E2010. Review. Long Term Treatment with Enzyme Replacement Therapy in Patients with Fabry Disease. Oder D, Nordbeck P, Wanner C. Nephron. 2016;134(1):30-6. doi: 10.1159/000448968. Epub 2016 Aug 27. Review. Fabry disease: Review and experience during newborn screening. Hsu TR, Niu DM. Trends Cardiovasc Med. 2018 May;28(4):274-281. doi: 10.1016/j.tcm.2017.10.001. Epub 2017 Oct 20. Review. 3 Table 3. Please specify the meaning of “p” ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Cornea verticillata and acroparesthesia efficiently discriminate clusters of severity in Fabry disease PONE-D-19-35853R1 Dear Dr. MAUHIN, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, Maria Vittoria Cubellis Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-19-35853R1 Cornea verticillata and acroparesthesia efficiently discriminate clusters of severity in Fabry disease Dear Dr. MAUHIN: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Maria Vittoria Cubellis Academic Editor PLOS ONE |
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