Peer Review History
| Original SubmissionOctober 15, 2019 |
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PONE-D-19-28826 Functional ability and quality of life in critical illness survivors with intensive care unit acquired weakness: a secondary analysis of a randomised controlled trial PLOS ONE Dear Dr. Eggmann, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version and much extended version of the manuscript that addresses the points raised during the review process. This is a re-analysis of a published RCT which turns it into an small observation study. Thus, as also pointed out be the reviewers below the authors have to provide evidence, that their findings are robust with regard to e.g. multipicitiy issues that arise when one data set is used for exploration. As a consequence, at least two compulsory requirements arise: (1) the main findings have to be replicated in an independent cohort of similar design and (2) the authors should make core (i.e. the data reported in this paper jointly with the analysis code to reproduce the findings) anonymized patient-level of the study and the related staistical programming code available. If both requirements cannot be met, I do not see how the PLOS ONE quality criteria can be met. We would appreciate receiving your revised manuscript by 02/01/2020. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, André Scherag, Ph.D. Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements: 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.plosone.org/attachments/PLOSOne_formatting_sample_main_body.pdf and http://www.plosone.org/attachments/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: A secondary analysis of data from a prior randomized trial in which exercise related outcomes did not differ was used to compare intensive care unit acquired weakness (ICUAW) categorized as severe, moderate or none. The primary outcomes were the 6-Minute Walk Test and Functional Independence Measure at hospital discharge. Secondary outcomes included health-related quality of life after six months. At discharge outcomes differed significantly, but at 6 months the outcomes were not statistically different. Minor revisions: 1- Lines 223 & 225: For clarity, replace 25% and 75% with first and third quartiles or simply indicate interquartile range. 2- Table 3: (A) For better clarity in presentation, consider adding a header row for each factor. For instance, above female/male add a row with the word “gender” in the first column. (B) For factors with more than two levels include the overall p-value for each factor rather than pairwise p-values. (C) In the title, clarify that crude results imply from univariate models and adjusted results are from a multivariate model. Reviewer #2: ICUAW might put ICU-survivors on increased risk for long-term functional impairment and increased mortality. Too little is known about risk-factors, correlates and long-term consequences of ICUAW. The authors present a prospective cohort study with a six-month follow-up, that is conducted as a secondary analysis of the data of a RCT. The study is limited by a rather small study sample and a follow-up period of only six months. While the study questions are of high importance, I see some serious flaws in the conducted analyses that require revise. My major concern is, what measures were used as predictors, and what measures where used as primary outcomes. While the primary outcomes of the RCT were measured at hospital discharge, the primary focus of this cohort study should be on the long-term outcomes measured at six months, since these are of higher relevance for patients. Specific subscales of the SF-36 that are most likely affected by ICUAW should be regarded as outcomes of primary interest (e.g. physical functioning, physical role functioning). Concerning MRC-test and 6-min walk test, it is hard to distinguish these two as measures of two different “illness entities”, since Jolley et al (2016, Chest) discuss the 6-Min. walk test as an indicator of ICUAW in the early recovery period. The measurement at hospital discharge might also be the better choice to identify patients that have ICUAW, since the measurement at ICU discharge might still reflect aspects of the acute critical illness that might be highly unstable till the early recovery phase is achieved. In my understanding, there are several indicators of ICUAW in the data of the RCT (MRC test, 6 min. walk test, grip strength etc.), some measured at ICU, other at hospital discharge. All of these might be suitable to predict 6-month follow-up status in an exploratory approach. The interrelatedness of all these indicators of ICUAW should be presented (maybe as a correlation-matrix in the supplement). Although the FIM cannot be considered a direct indicator of ICUAW it would be of interest to see, if it is able to predict respective functional subscales of the SF36 at 6 months. Consider to also predict the 6-min walk test (as an indicator of ICUAW during early recovery) from baseline and ICU-related risk-factors. General comments: I would recommend not to use categorized predictor variables (e.g. three categories of MRC-SS) in such a small study sample, since this severely can reduce power. Use continuous variables when possible and use categorization only for descriptive analysis. If hospital length of stay should be considered as an outcome, then only the days after ICU-discharge should be counted. T-values for SF-36 are calculated based on US-norms from 1990. There must be more recent and appropriate Norms available (e.g. there do exist recent German norm values). Given the small sample size, multivariable analysis should not use to many variables. I suggest using a method that reduces the number of variables for multivariate analysis (e.g. only significant in univariate analysis). To help interpret the results of the study, some considerations should be added on how big the test power was to detect relations between ICUAW indicators and SF-36 scales at 6-month follow up (referring to reasonable effect sizes obtained from earlier studies). It might be, that the power of the study was too small to find effects comparable to those that were previously reported. Based on such considerations “insignificant” findings in comparison to other studies should not be over-interpreted in the discussion. All results should be interpreted with caution because of the explorative nature of the study. Authors stated that all data are fully available but did not report where. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. 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| Revision 1 |
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Functional ability and quality of life in critical illness survivors with intensive care unit acquired weakness: a secondary analysis of a randomised controlled trial PONE-D-19-28826R1 Dear Dr. Eggmann, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, André Scherag, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: (No Response) Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors thoroughly and clearly addressed my prior comments. Thank-you! Reviewer #2: The authors have invested a lot of effort in improving the manuscript. Thank you very much for this. My only recommendation left is a change to the title: "Functional ability and quality of life in critical illness survivors with intensive care unit acquired weakness: a secondary analysis of a randomised controlled trial" This reads as if only patients with weakness were included. A possible change could be: "Effects of intensive care unit acquired weakness on functional ability and quality of life in critical illness survivors: a secondary analysis of a randomised controlled trial" ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No |
| Formally Accepted |
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PONE-D-19-28826R1 Functional ability and quality of life in critical illness survivors with intensive care unit acquired weakness: a secondary analysis of a randomised controlled trial Dear Dr. Eggmann: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Prof. Andre Scherag Academic Editor PLOS ONE |
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