Peer Review History
| Original SubmissionJanuary 17, 2020 |
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PONE-D-20-01560 Functional and structural consequences of epithelial cell invasion by Bordetella pertussis adenylate cyclase toxin PLOS ONE Dear Dr Daniel Isabey, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by April 10. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Daniela Flavia Hozbor Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and http://www.journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. We noticed you have some minor occurrence of overlapping text with the following previous publication(s), which needs to be addressed: https://www.tandfonline.com/doi/full/10.4161/sgtp.27958 https://www.sciencedirect.com/science/article/pii/B9780120884452500263?via%3Dihub In your revision ensure you cite all your sources (including your own works), and quote or rephrase any duplicated text outside the methods section. Further consideration is dependent on these concerns being addressed. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly Reviewer #2: Yes Reviewer #3: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: In the manuscript “Functional and structural consequences of epithelial cell invasion by Bordetella pertussis adenylate cyclase toxin” the authors describe major effects of CyaA on epithelial cell structure and function. This work builds incrementally on earlier data to show that these cells, when treated with CyaA, also display altered cell morphology, cytoskeletal stiffness and impaired wound healing capacity. The manuscript is clearly written, logically presented and nicely demonstrates the dramatic effect of CyaA intoxication on epithelial cells, a cell type not typically associated with CyaA-mediated pathologies. However, the authors should be careful not to attribute CyaA-mediated effects solely to elevated cAMP in those studies in which a control, demonstrating the cAMP-dependence, is not included. Major and minor comments provided below. Major comments: 1. Experiments performed in Fig 7 could be improved with the addition of cytochalasin D to the CyaA treated cells to demonstrate the actin dependence of the CyaA-mediated effects 2. In earlier work, this group demonstrated that CyaA reduced the viability of A549 cells within 15 min of exposure to 10 nM CyaA, while a non-significant reduction was observed at 60 min with 0.5 nM CyaA. And, in Fig S1 CyaA is again demonstrated to reduce cell viability. The results presented in Fig 8 represent cells treated for 60 min with CyaA and measurements are displayed from 4 hours. In order to be consistent with the wound repair parameters, it would be good to include the cell viability as assessed at similar time points to those used in Fig 8. There is presumably significant loss in cell viability in treated cells in this assay. The authors should consider that a reduction in wound healing may not be solely attributable to a disrupted actin CSK. Loss in cell viability should be mentioned as a possible alternative mechanism or loss in cell viability should be controlled for in the experimental design. 3. In the conclusions, it is stated that “the large increase in intracellular cAMP elicits various structural and functional modifications of the cells, including cell rounding, weakening of adhesions, remodeling of actin structures and of cytoskeleton stiffness” and that this “leads to a drastic inhibition of cell migration and wound repair capabilities”. However, in this manuscript, only the actions of CyaA on wound repair were proven to be cAMP-dependent, as the impact of CyaA was ablated when an enzymatically inactive CyaAE5 was added in place of active CyaA. In order to attribute the actions of CyaA to elevated cAMP levels for the remaining parameters, the authors must repeat these studies using CyaAE5 or with treatment targeting the reduction of cAMP e.g. Rp-8-Br-cAMPs Minor comments: 1. In the materials and methods, the description of A549 culture is extensive and may be reduced 2. Line 80, spell out the LQ amino acids when first described 3. Line 103, provide first description for “ACD” 4. Line 108, provide first description for “SVF” 5. Provide abbreviation for CSK at first usage (line 131 not line 240) 6. Line 156, provide information on how cells were selected for structural analysis e.g. 5 random fields etc. 7. Section “Measure of CSK stiffness by MTC” identify the instrument used for this method 8. Figure 8 could be improved by the addition of images of the end point of the wound healing assay; demonstrating a healed zone for control cells vs minimal healing by the CyaA-treated cells. 9. In support of a cAMP-mediated role in impaired wound repair, it may be worth mentioning that A549 cells treated with cAMP-increasing molecules (forskolin, isoproterenol, dibutyryl cAMP) display reduced cell migration and wound healing (See RGS19 upregulates Nm23-H1/2 metastasis suppressors by transcriptional activation via the cAMP/PKA/CREB pathway) 10. A549 cells possess some phenotypic plasticity, it could be interesting to determine whether high cAMP levels alter the cell differentiation state. For example, if it drives the cell away from a proliferative and reparative alveolar type 2 epithelial phenotype and towards a more quiescent AEC type 1 or perhaps even a neuroendocrine-like cell (high cAMP levels promote neuroendocrine differentiation in A549 cells, reference: Effect of A549 neuroendocrine differentiation on cytotoxic immune response) Reviewer #2: Manuscript by Angely et al. describes structural and functional effects of Bordetella adenylate cyclase toxin on cytoskeleton of A549 alveolar epithelial cells. The main message of manuscript is far from being novel, nevertheless the manuscript is technically sound, and seems to merit PlosOne publication criteria. The only major concern is the cytotoxicity of 5nM and 10 nM CyaA (Suppl.Fig.1) and the use of these CyaA concentrations in the other assays in addition to 0.5nM. One may then ask wheter there is actually an effect of CyaA on cytoskeleton stiffness (Fig7) or whether the effect on cell migration is so dramatic (Fig8). Minor comment: Authors may want to explain better the rationele behind using manganese in their experiments. Reviewer #3: The authors present a data concerning the effects of CyaA (ACT) toxin on epithelial cells. CyaA has been extensively characterized in regards to its effects on phagocytes and other immune cells. The manuscript shows data speaking to the structural effects of high cAMP on cells in vitro. Multiple assays are used to backup the findings. Overall the manuscript it easy to read and clear. Major concerns - In the abstract one sentence reads: "We also show that, at the low concentrations that may be found in vivo during B. pertussis infection, CyaA impairs the migration and wound healing capacities of the intoxicated alveolar epithelial cells." This re viewer does not believe that data are fully available to determine the exact amount of CyaA in vivo during infection. Some studies have shown staining with anti-CyaA. Overall it is not clear how much CyaA is in the respiratory tract of experimental animals or infected humans. The authors should refrain for over-extrapolation of the data and revise the statement in the abstract to read "We also show that, at the low concentrations (insert amounts)...." It is appropriate for the authors to discuss CyaA in vivo concentrations in the discussion. Minor concerns none ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Karen M Scanlon Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Functional and structural consequences of epithelial cell invasion by Bordetella pertussis adenylate cyclase toxin PONE-D-20-01560R1 Dear Dr. Daniel Isabey, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, Daniela Flavia Hozbor Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: (No Response) ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: (No Response) ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: (No Response) ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: (No Response) ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Karen M Scanlon |
| Formally Accepted |
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PONE-D-20-01560R1 Functional and structural consequences of epithelial cell invasion by Bordetella pertussis adenylate cyclase toxin Dear Dr. Isabey: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Daniela Flavia Hozbor Academic Editor PLOS ONE |
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