Peer Review History
| Original SubmissionSeptember 11, 2019 |
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PONE-D-19-25601 Estimating the impact of drug use on US mortality, 1999-2016 PLOS ONE Dear Dr. Glei, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Reviewers highlighted the relevance and timeliness of this manuscript. However, they identified some minor issues that require your attention before this paper can be published. We would appreciate receiving your revised manuscript by Dec 09 2019 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, João Pedro Silva, PhD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1) Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and http://www.journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2) We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Overall, the study is an excellent complement to the Global Burden of Disease (GBD) Study in estimating the drug-coded related mortality. It provided a robust estimate of the current condition of the drug-use epidemic in the United States in the broader year period from 1999-2016. The reviewer would want to point out some minor issues which the reviewer thinks might enhance the quality of the publication. 1. In the introduction, the authors used the term "drug-use" repeatedly without an effort to elaborate on the definition further. The reviewer understood that they had used the ICD-10 definition, which the reviewer only found out in the methods section. Thus, the reviewer suggests defining the scope of the term "drug-use" earlier in the introduction section. 2. In lines 46-49. The authors stated the following 46 "obvious connection with accidental poisoning, drug use may affect other disease and injury 47 processes resulting in deaths assigned to other causes that would not necessarily be 48 considered drug-related. A meta-analysis indicated that standardized mortality rates among 49 opioid-dependent individuals are almost 15 times those of the general population." What is not clear for the reviewer is when they refer to other "diseases and injury not necessarily be considered drug-related. The reviewer understood that for these conditions, drug-use might be an antecedent cause of maybe a contributory or precipitating factors that led to these outcomes. 3.The authors mentioned in line 58 "viral hepatitis." Viral hepatitis has several subtypes; the reviewer suggests to specify the subtype (B, C), etc. 4.In line 65, the authors repeated that drugs are an indirect cause which the reviewer finds confusing 5.Drug use definition, this can be resolved when the suggestion number 1 is addressed. 6.There are related articles such as the one from Shiels https://www.thelancet.com/journals/lanpub/article/PIIS2468-2667(18)30208-1/fulltext and Ruhm https://pophealthmetrics.biomedcentral.com/articles/10.1186/s12963-016-0071-7 which have used the same data sources but was not cited in the introduction. The reviewer suggests referencing the previous studies and how different the current study is when compared to both. METHODS: The reviewer would want to see an explanation on the omission of alcohol in the elaboration model such as mortality from drugs vis-a-vis alcohol use vs drugs plus alcohol use. The authors did a model elaboration for smoking but not for alcohol consumption. A good reference is included below. The second component of the key indicator complements routine statistics and provides data on the overall and cause specific mortality rate based on a cohort of drug users, usually in contact with drug treatment services. The mortality rates include deaths directly induced by use of drugs (overdoses) and deaths that may be indirectly related to drug use such as infectious diseases, injuries and violence, suicides, and other causes of death that may be related to other aspects (such as smoking or alcohol-related causes, mental health problems, or social exclusion). However, this component is less readily available in all countries as it is based on specific studies, which are more resource intensive and often limited in time and geographical coverage, compared to the first component of the fundamental indicator. http://www.emcdda.europa.eu/attachements.cfm/att_67050_EN_EMCDDA-DRD-overview.pdf 2. The authors mentioned at line 195 that they anticipate that non-drug related 196 mental/behavioural disorders and ill-defined causes may be negatively associated with drug197 coded mortality because these are the categories where coding confusions are most likely to 198 occur with drug-coded mortality. The reviewer would want to know the reference for this assumption. DISCUSSION: The discussion should also discuss how the findings are in contrary or how it supports the earlier findings of the previous studies that address the same objectives. Both of the previous studies the reviewer referenced here noted mixed results where there is a notable decline in subgroups, but there is a remarkable rise in other subgroups. Reviewer #2: This paper quantifies the mortality burden from narcotic drug use in the US. The paper is timely: the number of drug-coded deaths in the US is alarmingly high. However not all drug-related deaths are coded as such. Some of these deaths are due to the sequelae of narcotics use, and might include for example cardiovascular related deaths from cocaine use. The current paper uses a regression-based method to estimate the number of narcotic related deaths that are not coded as such. In particular, the authors examine the association between drug-coded mortality rates (MD) and death rates from all other causes (MND) for the US population aged 15 and older. The models are estimated using mortality data collected for each of the 27,000 unique combinations of US state, sex, 5-year age group and year over the period 1999-2016. More specifically, the authors estimate negative binomial regressions of the log of MND as a function of MD, indicators of state, sex, age group and year, and interactions between MD and age group indicators (so as to allow the impact of MD on MND to vary by age). After estimating the model parameters, the authors predict log MND given a value of MD (and presumably the values of the indicator variables). The authors then estimate a number of additional subgroup specific models. These variations include models of cause-specific MND. The results are striking. Among non-seniors, there were 2.2 MND deaths for every MD. Most of these MND deaths were circulatory related, as one might expect. I was impressed with the overall quality of the study. It appears to be the first study of its kind for the US. It was well written, thorough and the limitations were clearly expressed. The most important limitation is that of omitted variables bias – these are variables that cause MND that are related to MD. The authors give the following example: “For example, chronic illnesses could increase pain levels, which in turn might lead to opioid use and abuse. Thus, there could be a spurious association between overdose deaths and mortality from chronic diseases like heart disease and diabetes.” The authors also indicate another example: “Case and Deaton [39, 40] suggested that increasing midlife distress may explain increased death rates among middle-aged non-Hispanic whites not only from drug overdose but also from suicide and alcohol-related mortality. Our estimates of drug associated mortality would be biased upwards if an underlying factor of despair is causing increases in both drug-coded mortality and death rates from other causes, producing a spurious correlation.” I wonder if the problem is as severe as the authors indicate. In particular, wouldn’t the time indicators pick up these rising levels of midlife crises? If not, then the authors rightly interpret their estimates as an upper bound on the estimated impact of MD on MND. I had only one substantive suggestion for the authors. I wonder if it is possible to use instrumental variables techniques here – this would require instruments, variables strongly associated with MD that are not associated with the confounding factors that the authors allude to. Is the case for instance that the local availability of narcotics (being close to international smuggling routes) affects MD. If so then this variable might be profitably used to implement an IV strategy. Certainly the sample size is large enough to do so. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: MELVIN BARRIENTOS MARZAN Reviewer #2: Yes: Paul Grootendorst [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Estimating the impact of drug use on US mortality, 1999-2016 PONE-D-19-25601R1 Dear Dr. Glei, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, João Pedro Silva, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: No |
| Formally Accepted |
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PONE-D-19-25601R1 Estimating the impact of drug use on US mortality, 1999-2016 Dear Dr. Glei: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. João Pedro Silva Academic Editor PLOS ONE |
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