Peer Review History
| Original SubmissionOctober 3, 2019 |
|---|
|
PONE-D-19-27751 Early conservation benefits of a de facto marine protected area at San Clemente Island, California PLOS ONE Dear Mr. Esgro, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. I found this to be a really interesting and generally well written manuscript and both reviewers agreed. However, both reviewers have also identified some areas where the manuscript could be improved, mainly around clarifying points and methods in the manuscript. I have also provided some editorial comments. Overall, I think these comments are relatively minor and can be easily addressed. I encourage the authors to address all the comments provided when making their revisions. We would appreciate receiving your revised manuscript by Dec 30 2019 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Heather M. Patterson, Ph.D. Academic Editor PLOS ONE Journal Requirements: 1. When submitting your revision, we need you to address these additional requirements. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and http://www.journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2. In your Methods section, please provide additional information regarding the permits you obtained for the work. Please ensure you have included the full name of the authority that approved the field site access and, if no permits were required, a brief statement explaining why. 3. We note that you have indicated that data from this study are available upon request. PLOS only allows data to be available upon request if there are legal or ethical restrictions on sharing data publicly. For more information on unacceptable data access restrictions, please see http://journals.plos.org/plosone/s/data-availability#loc-unacceptable-data-access-restrictions. In your revised cover letter, please address the following prompts: a) If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. b) If there are no restrictions, please upload the minimal anonymized data set necessary to replicate your study findings as either Supporting Information files or to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of acceptable repositories, please see http://journals.plos.org/plosone/s/data-availability#loc-recommended-repositories. We will update your Data Availability statement on your behalf to reflect the information you provide. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: This is a clear and compelling paper that evaluates some of the effects of restricted use in a de facto marine protected area (DFMPA) off the California coast. The subject is of particular interest as countries look for ways to ramp up the percent protected area coverage of their maritime jurisdictions. Military restrictions around San Clemente Island present an opportunity to study a controlled area and compare biomass and community structure with adjacent fished areas. The paper is technically sound, extremely well-written, and presents the data that were used in the analysis. However, regarding whether the data can be said to support the conclusions, this is the paper’s greatest weakness. The authors claim that the lack of differentiation in biodiversity metrics between the DFMPA and fished sites for most species surveyed is due to longer trajectories of recovery for species other than sheephead and ocean whitefish – but does what we know about the life histories the other species support this contention? An alternative hypothesis might be that fishing pressure in the fished area is spread across many species, and therefore does not alter the community ecology (therefore not presenting a condition from which recovery can be measured). Or perhaps microhabitats do vary between fished and DFMPA sites – these were not assessed and as the authors themselves state, may be a bigger factor in determining condition (biomass and diversity) than fishing pressure. Differential spillover is unlikely, unless the authors can point to some aspect of reproductive ecology or larval dispersion of the sheephead and whitefish not shared by the other species. Since the data collected and the time since closure are both limited, it may be too early and too much of a stretch to speculate as to why the DFMPA has bigger specimens and higher densities of sheephead and whitefish and not the other species. I believe the paper would also benefit from an expanded discussion around Other Effective Conservation Measures (OECMs). The authors are undoubtedly aware of the very fluid (and sometimes highly contentious) debates around what constitutes OECMs, and the fact that there is a lot of pressure to make the definition as wide as possible so that contracting parties to the Convention on Biological Diversity can claim to be approaching Aichi Target 11, thereby keeping to their commitments. However, the draft decision of the SBBSTA (CBD/SBSTTA/22/L.2 6 July 2018) does say that the definition of OECM covers considerations of governance, including equity issues, which military bases and restricted areas could not be said to fulfill. Furthermore, while the DFMPA studied does demonstrate tangible conservation benefits for two heavily fished species, no assessment was made of how routine military operations or periodic exercises affect all species in the area, including marine mammals. ‘Effective conservation’ within the OECM means conservation of all species, not only a select few. The paper should be forthright about mentioning these limitations. Another area where the paper could be strengthened is in the discussion of future research – in particular how to overcome the design flaw that the current study has in that it had no reference points in fished areas other than those adjacent to the DFMPA. Spillover could confound the existing comparison, as could any perception issues among fishers that would limit their fishing in the areas adjacent to the restricted area (if, for instance, fishers were wary of accidentally entering the restricted area). If any information is currently available on the recreational fisheries taking place in the vicinity of the DFMPA, it would be useful to include this. The specific characteristics of the fishery(ies) may also pertain to trying to surmise why the reserve effect is measurable for sheephead and whitefish – perhaps recreational fishers target primarily these two species? And getting back to the next steps part of the discussion, the authors could provide more detail on how an expanded sampling design could overcome some of the weaknesses of the original limited research. One might argue that it would be necessary to conduct this additional research and feed the additional data into the analysis, before the paper could be ready for publication. However, even though the findings are limited and the implications circumscribed, this paper is pioneering and merits publication. With a more robust discussion of what constitutes OECM and how DFMPAs can add value alongside proper MPAs, the paper will provide valuable guidance to MPA planners and to marine spatial planners looking at wider scale marine management and conservation. One very minor point: in Line 61, recommend substituting ‘very little research’ with ‘very few published studies’ – no one knows how much research is going on, especially if the research is not yielding significant results. Reviewer #2: In this study, the authors used ROV surveys to compare the density, size structure, and biomass of fishes between a de facto marine protected area (DFMPA) and a fished site on San Clemente Island, California, in the 2-3 years following full closure of the DFMPA. The authors report differences in the density and biomass of one fish species (California sheephead) and biomass of another fish species (ocean whitefish), but no differences in diversity, community structure, or the abundance and biomass of any other species. Below are specific comments for the authors to consider. - How long has the DFMPA been in place in Zone G? When were the 8 naval safety zones established? What fraction of the time are the other zones closed to human activities, such as fishing? It sounds like the other zones can serve as partial DFMPAs, depending on the frequency with which they are closed due to military activities. OK… I see that in the methods the timing of implementation of the DFMPA was 2010. This should be mentioned in the abstract and probably earlier in the intro as well. If the surveys occurred in 2012 and 2013, then it appears that the area was only closed for 3 years. If that is the case, it’s not surprising that few significant differences were detected, especially if fishing pressure in zone F isn’t too intense. - Line 133. I think maybe the wrong citation is used for fishing pressure at San Clemente. I think this should be reference 23, not 24. In addition, more detail is needed to quantify how much fishing pressure occurs in zone F, as opposed to more generally at San Clemente Island. Zone F is on the windward side and far from the most popular anchorage, so how much fishing pressure actually occurs there? If not all that much, that could explain why differences between the DFMPA and fished zone were not great for most species. - One of the major challenges with this study is that it only compares 1 DFMPA to 1 fished area outside the DFMPA. This needs to be discussed in more detail, because the differences or lack of differences observed could be due to this design. The authors include some simple comparisons of habitat between the two areas, suggesting that habitat is similar. However, that analysis used simple metrics of percent rocky habitat and depth. What is not shown is whether the habitat quality is similar or not. How does the rugosity and complexity of the rocky habitat compare between the two zones? If one has mainly flat rock and the other has much more complex 3-dimensional habitat with higher relief, that could explain the differences in sheephead and ocean whitefish density and biomass, irrespective of fishing pressure. The size distribution comparison for sheephead shows that not only are larger fish present in the DFMPA, but also new recruits and small juvenile size classes are present as well. That could be an indicator of better habitat quality for all size classes of this species in the DFMPA. Lastly, Zone G is located at the northern tip of the island. Many studies show higher densities and biomass of fishes at the tips of islands, reefs, and atolls, due to stronger currents, productivity, and prey availability at the tips. This oceanographically-driven phenomenon could be another explanation for higher sheephead density and biomass, that should be discussed. - More description is needed of the video imagery analysis section. How do you define a non-overlapping video quadrat? What are the dimensions of the quadrat? How many quadrats per transect? - Even though the community structure was similar in the multivariate analysis, it would still be useful to include the nMDS figure to show the reader how the sites overlap. Where the community structure analyses done using density or biomass and the response variable. Are the results the same for both metrics? - The analysis comparing size distributions between the DFMPA and fished site should be placed in the results section and not saved for the discussion. Size frequency distribution comparisons should also be shown for some of the other common species sampled. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step.
|
| Revision 1 |
|
Early conservation benefits of a de facto marine protected area at San Clemente Island, California PONE-D-19-27751R1 Dear Dr. Esgro, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, Heather M. Patterson, Ph.D. Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-19-27751R1 Early conservation benefits of a de facto marine protected area at San Clemente Island, California Dear Dr. Esgro: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Heather M. Patterson Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .