Fig 1.
Workflow of Alternative Splicing Analysis in Plasma-Treated and Control Tomato Plants Infected with ToBRFV.
Fig 2.
Plasma-induced alternative splicing patterns in tomato seedlings infected by ToBRFV.
(a) Venn diagram comparing AS events between plasma-treated (P3) and control seedlings. (b) Distribution of AS event types among plasma-specific genes.
Fig 3.
Chromosomal distribution of plasma-specific alternative splicing events in tomato seedlings infected by ToBRFV.
Fig 4.
Gene Ontology (GO) enrichment analysis of genes exhibiting plasma-specific alternative splicing events in plant tomatoes infected by ToBRFV (FDR < 0.05).
Fig 5.
KEGG pathway enrichment of plasma-specific alternatively spliced genes in the tomato plant.
–log10 adjusted p-value.
Fig 6.
Regulatory network of plasma-responsive tomato microRNAs and their alternatively spliced target genes under ToBRFV infection using psRNATarget.
Table 1.
Differentially expressed and alternatively spliced genes identified in plasma (P3) and Control Samples under ToBRFV Infection.