Fig 1.
Statistical analysis of SNP variation types (A).
InDel (insert missing mark) length statistics (B).
Fig 2.
Genetic population number of H. armigera (K = 1-7) in various regions in Xinjiang was evaluated by Structure software (A). Population structure of H. armigera in various regions in Xinjiang was analyzed based on SNPs (B).
Fig 3.
Principal component analysis of the natural population of cotton bollworm in various regions of Xinjiang.
Fig 4.
Phylogenetic tree of the natural population of H. armigera in various regions of Xinjiang Note: Regarding the numbers after the abbreviations for place names, 19 means the sample was taken in 2019, 20 means the sample was taken in 2020, and “-1, -2, -3...” represents the sample number.
Table 1.
Genetic diversity index of natural populations of H. armigera in various regions of Xinjiang.
Table 2.
Genetic differentiation coefficient (FST value) among natural populations of H. armigera in various regions of Xinjiang.
Fig 5.
LD values of five H. armigera subpopulations in various regions of Xinjiang.
Fig 6.
Manhatan diagram for correlation analysis of feeding traits of H. armigera.
The dotted line represents the threshold of potential genome-wide significant association: -log10 = 3.34.
Table 3.
Information of genes associated with SNP source sequences of H. armigera (comparing the genome of H. armigera).