Table 1.
Demographic, clinical, and genomic characteristics of CHIKV strains from the 2024 outbreak in Khyber Pakhtunkhwa, Pakistan.
Fig 1.
Unrooted Phylogenetic trees of the CHIKV.
Study sequences are highlighted in red triangles for 2024, while previous sequences from Pakistan are color-coded as follows: Blue triangle for 2017 and green triangle for 2016. The tree was using the maximum likelihood method with 1,000 bootstrap replicates in MEGA-11 software. The Genotypes are represented by colored dashed lines.
Table 2.
Amino acid variation in the structural genes of CHIKV study isolates in comparison with the reference strain and previously reported sequences from Pakistan.
Table 3.
Amino acid variation in the non-structural genes of CHKIV study isolates compared with the reference strain and previously reported sequences from Pakistan.