Fig 1.
Mean zone of Inhibition of Different concentrations of C. annum and S. tuberosum of R. solani.
The error bars represent standard errors of the mean.
Table 1.
Effects (zone of inhibition, mm) of peptide rich extracts from C. annum and S. tuberosum against R. solani.
Table 2.
Effect of peptide rich extracts from C. annum and S. tuberosum on the Minimum Inhibitory Concentration (MIC) on R. solani.
Table 3.
Effect of peptide rich extracts from C. annum and S. tuberosum on the Minimum Fungicidal Concentration (MFC) on R. solani.
Table 4.
Protein-peptide docking scores.
Fig 2.
RMSD in C-α atoms of A) histone demethylase, B) AMP bound to histone demethylase, C) Sortin, D) AMP bound to sortin, E) Squalene, and F) AMP bound to squalene.
Fig 3.
RMSF in residues of A) histone demethylase, B) AMP bound to histone demethylase, C) Sortin, D) AMP bound to sortin, E) Squalene, and F) AMP bound to squalene.
Fig 4.
Results of radius of gyration.
Rg in A) histone demethylase, B) AMP bound to histone demethylase, C) Sortin, D) AMP bound to sortin, E) Squalene, and F) AMP bound to squalene.
Fig 5.
Hydrogen bond analysis for (A) histone demethylase and AMPs, (B) sortin and AMPs and (C) squalene and AMPs.
Fig 6.
Gibb’s free energy analysis for histone demethylase complexes.
A) Histone demethylase, B) Histone demethylase-AMP1 complex, C) Histone demethylase-AMP3 complex, D) Histone demethylase-AMP10 complex, E) Histone demethylase-AMP12b complex, and F) Histone demethylase-AMP15 complex.
Fig 7.
Gibb’s free energy analysis for sortin complexes.
A) Sortin, B) Sortin AMP6 complex, C) Sortin AMP10 complex, D) Sortin AMP12a complex, E) Sortin AMP12b complex, and F) Sortin AMP15 complex.
Fig 8.
Gibb’s free energy analysis for squalene complexes.
A) Squalene, B) Squalene AMP3 complex, C) Squalene AMP4 complex, D) Squalene AMP6 complex, E) Squalene AMP10 complex, F) Squalene AMP12b complex.
Fig 9.
DSSP analysis of histone demethylase and bound AMPs.
A) Histone demethylase, B) Histone demethylase-AMP1 complex, C) Histone demethylase-AMP3 complex, D) Histone demethylase-AMP10 complex, E) Histone demethylase-AMP12b complex, and F) Histone demethylase-AMP15 complex.
Fig 10.
DSSP analysis of Sortin and bound AMPs.
A) Sortin, B) Sortin AMP6 complex, C) Sortin AMP10 complex, D) Sortin AMP12a complex, E) Sortin AMP12b complex, and F) Sortin AMP15 complex.
Fig 11.
DSSP analysis of Squalene and bound AMPs.
A) Squalene, B) Squalene AMP3 complex, C) Squalene AMP4 complex, D) Squalene AMP6 complex, E) Squalene AMP10 complex, F) Squalene AMP12b complex.
Fig 12.
DSSP analysis of Histone demethylase AMP complexes.
A) Histone demethylase, B) Histone demethylase-AMP1 complex, C) Histone demethylase-AMP3 complex, D) Histone demethylase-AMP10 complex, E) Histone demethylase-AMP12b complex, and F) Histone demethylase-AMP15 complex.
Fig 13.
DSSP analysis of Sortin AMP complexes.
A) Sortin, B) Sortin AMP6 complex, C) Sortin AMP10 complex, D) Sortin AMP12a complex, E) Sortin AMP12b complex, and F) Sortin AMP15 complex.
Fig 14.
DSSP analysis of Squalene AMP complexes.
A) Squalene, B) Squalene AMP3 complex, C) Squalene AMP4 complex, D) Squalene AMP6 complex, E) Squalene AMP10 complex, F) Squalene AMP12b complex.
Table 5.
Results of MM-PBSA calculations.