Table 1.
Names and origins of tepary bean germplasm collection used in the study.
Fig 1.
Single nucleotide polymorphism markers characteristics: A = Polymorphic Information Content (PIC), B = Minor allele frequency (MAF) and C = Gene diversity (GD).
Fig 2.
Single nucleotide polymorphism density plot mapped in 78 tepary bean genotypes.
Table 2.
Genetic parameters computed from genetic diversity assessment of tepary bean germplasm using high-density SNP markers.
Fig 3.
Tepary bean population structure based on cross-entropy (left) and principal component analysis (right) employing 10527 high-density SNP markers.
Fig 4.
Population admixtures in 78 tepary bean genotypes using 10527 high-density SNP markers.
Fig 5.
Fixation index (FST) of five tepary bean subpopulations determined from population structure analysis based on SNP markers.
Table 3.
Population pair-wise fixation index of 78 tepary bean genotypes genotyped using SNPs markers.
Fig 6.
Principal coordinate analysis (PCoA) of tepary bean genotypes based on population structure using SNPs markers.
Table 4.
Analysis of molecular variance in tepary bean germplasm collection based on SNP markers.
Fig 7.
Dendrogram showing the five genetic clusters (Cluster 1 to 5) among 78 tepary bean genotypes based on SNPs markers.
See codes of genotypes in “Table 1”.