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Fig 1.

ggmotif workflow.

The ggmotif workflow consists of several functions, including the ggmotif package, ggtree package, and ggseqlogo package.

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Fig 2.

The location of motifs on the corresponding sequences.

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Fig 2 Expand

Fig 3.

The location of motifs on the corresponding sequences (right panel) and the corresponding phylogenetic tree (left panel). The light blue and orange dots in Fig 3B represent the number of AP2/ERF domains in the corresponding sequences.

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Fig 3 Expand