Fig 1.
The top left panel is used for plotting, the top right panel is an interactive image viewer and the bottom section shows the interactive data table with a tab to access a second image viewer. The red dot in the image viewer indicate the position of the segmented object corresponding to the selected data point shown in black in the scatter plot and highlighted in the data table.
Fig 2.
Use of a second image viewer to simultaneously visualize the original image and the segmentation mask corresponding to a selected data point.
Fig 3.
A—Box plot of nucleolar number per siRNA as produced by the IDE. Each colour corresponds to data from one siRNA. B—Output of the XGBoost classifier. Left panel: Plot of relative feature importance, colours are used to indicate clusters of features with similar importance. Right panel: Information ato assess performance of the trained classifier.