Fig 1.
(A): Heatmap shows the relative copy numbers of the resistance genes. Isolates are arranged on the X axis and are given names starting with K, followed by the number of each sample. Genes are plotted on the Y- axis. Genes with a darker blue colour have a relatively high copy number in a given sample, (B): Heatmap shows each virulence factor in each isolate. Isolates are arranged on the X axis, while virulence factors are plotted on the Y- axis. Virulence factors with a darker blue colour have a relatively high copy number in a given sample, while virulence factors with a lighter blue-white colour have a relatively low copy number in comparison to others, (C): Heatmap shows each insertion sequence in each isolate. Isolates are arranged on the X axis, while insertion sequences are plotted on the Y- axis. Insertion sequences with a darker blue colour have a relatively high copy number in a given sample, while insertion sequences with a lighter blue-white colour have a relatively low copy number in comparison to others.
Fig 2.
CRISPR arrays detected in the K. pneumoniae K04 as a representative of our samples.
Two different characterization of CRISPR arrays detected including (CRISPR 1) and (CRISPR 2) in K. pneumoniae K04. CRISPR1 array is composed of 23 direct repeated sequences and 22 spacer sequences located at nucleotides 14122 to 15499. CRISPR2 array is composed of 10 direct repeated sequences and 9 spacer sequences located at nucleotides 24252 to 24830.
Fig 3.
Circular genomic map comparing our isolates to the reference genome of Klebsiella pneumoniae strain C17KP0052 (Accession number: CP052388.1).
The black histogram represents the CG content, and the green-purple histogram represents the CG skew.