Fig 1.
The overall framework used for identifying and characterizing TEs in Cicer species and the steps involved in creating CicerSpTEdb.
Table 1.
Summary of the intact TEs identified in Cicer species.
Fig 2.
The distribution of intact TEs across eight chickpea chromosomes.
The outermost circle in pink-colored represents eight C. arietinum chromosomes (CA1 to CA8). The middle circle illustrates the distribution of TE types in different colors, and the innermost circle shows the histogram of TE types in each chromosome.
Fig 3.
Estimation of Cicer species LTR-RT insertion age in millions of years (My).
Fig 4.
The distribution of C. arietinum TEs superfamilies according to their length.
Table 2.
Summary of the C. arietinum TEs that are positioned inside or nearby genes.
Fig 5.
Gene ontology of 213 C. arietinum TE-gene chimeras assigned to 393 biological processes GO terms.
Fig 6.
Protein-protein interaction for TE-gene chimeras.
Fig 7.
CicerSpTEdb’s TE general search page.
Fig 8.
CicerSpTEdb’s search page for TEs located within genes.
Fig 9.
CicerSpTEdb’s JBrowse page.