Table 1.
List of data used to validate the PAN2HGENE tool.
Fig 1.
Identification of gene products missing from the original sequence is shown in yellow and the process of comparative analysis is shown in green.
Table 2.
List of products identified through the PAN2HGENE pipeline.
Fig 2.
(A) Pangenome obtained using the PAN2HGENE software. (B) PGAP desktop results. The respective alpha values for the mean and median follow Heap’s law.
Fig 3.
Graphs representing the number of unique genes identified in each species using PAN2HGENE (A) and PGAP (B) analyses.
Fig 4.
Pie chart representing the genes shared between strains using PAN2HGENE (A) and PGAP (B) analyses.
Fig 5.
Result of pangenomic analysis using different annotation software.
(A) pangenomic analysis using Prokka software and (B) analysis using the RAST platform.
Table 3.
Summary about features performed by software BPGA, Roary and PAN2HGENE.