Table 1.
Genome and read alignment statistics for reference genomes and high, medium, and low coverage field cultures.
Table 2.
Very low coverage genomes originated from 11 populations of Mojave desert tortoises (Gopherus agassizii) and one population of Sonoran desert tortoises (Gopherus morafkai).
Fig 1.
Locations in the Mojave and Sonoran Deserts where Mycoplasma spp. isolates were collected.
Locations are color-coded based on genome coverage from next-generation sequencing: high (>40x), medium (>25x), low (>2x), and very low (<2x). The map was created with data from the USGS National Map Viewer.
Fig 2.
Maximum likelihood phylogenetic tree of Mycoplasma agassizii from eight samples with low to high coverage and the PS6T and 723 strains based on 1373 SNPs.
Table 3.
Disease status (clinical signs and Mycoplasma agassizii) of individuals and their respective populations from which high-quality genome sequences were obtained (see Table 1).