Table 1.
Number of SNPs and minor allele frequencies of SNPs by chromosome in 515 Ningxiang pigs after data edits, each genotyped with either an Illumina Porcine SNP60 array or GeneSeek Genomic Profiler (GGP) Porcine 50K arraya,b.
Fig 1.
Distributions of simulated QTL effects (A) and true breeding values (B) of average daily body weight gain for 303 Ningxiang pigs.
Fig 2.
Correlation plots of genomic-estimated kinship coefficients between individual animals within each of two Ningxiang pig populations.
Fig 3.
Comparison of simulated genetic gain on average daily body weight gain (A) and average inbreeding based on runs of homozygosity (B), which were obtained under two scenarios of genomic OCS (GOCS_S and GOCS_SD) and genomic selection (GS) without inbreeding control, respectively.