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Table 1.

Characteristics of sample at baseline.

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Table 2.

Alpha diversity measures and descriptions.

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Table 3.

Summary of alpha diversity metrics.

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Fig 1.

Correlations among alpha diversity indices.

Correlations among all calculated alpha diversity indices are displayed. Positive correlations displayed in blue, and negative correlations displayed in red. Stronger correlations denoted by greater opaqueness.

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Fig 2.

Scree plot of alpha diversity indices.

Scree plot showing likely number of factors underlying the relationships among alpha diversity indices.

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Table 4.

Results of the exploratory factor analysis.

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Table 4 Expand

Table 5.

Associations between microbiome composites and variables of interest.

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Table 6.

Results of the exploratory factor analysis with all observed alpha diversity metrics.

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