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Fig 1.

Conceptual diagram of nitrification and the “holes-in-a-pipe” concept.

Ts, soil temperature; WFPS, water-filled pore space.

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Fig 2.

Relationship between the fraction of nitrification-associated N2O emission (fN2Onit) assumed in the models.

(a) DNDC and (b) DLEM. WFPS, water-filled pore space.

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Fig 3.

PRISMA flow diagram.

PRISMA, Preferred Reporting Items for Systematic Reviews and Meta-Analysis.

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Table 1.

List derived from literature search of methods to measure nitrification-associated N2O flux.

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Fig 4.

Histogram of the N2O emission associated with nitrification, obtained by a meta-analysis of 71 observations.

(a) All data, (b) data of 0–1%, and (c) data of 1–10%.

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Table 2.

Summary of statistics on measured nitrification N2O emission ratio.

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Fig 5.

Distributions of estimated fraction of nitrification-associated N2O emission, fN2Onit.

(a) DNDC and (b) DLEM parameterizations.

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Fig 6.

Sensitivity analysis of global N2O emission to the fraction of nitrification-associated N2O emission, fN2Onit.

(a) Fixed 1%, (b) soil pH-based parameterization, and (c) median of meta-analysis records (0.139%, outliers removed). Each N2O flux was estimated by using the VISIT model. Decadal mean values for the 1980s, 1990s, and 2000s are shown.

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Fig 7.

Parameterization of nitrification-associated N2O emission fraction, fN2Onit as a function of soil pH.

(a) Relationships in the meta-analysis data. Orange dashed curve is obtained by Gauss-Newton non-linear regression of an exponential function: fN2Onit = 47.59 exp(–1.345 · pH) (R2 = 0.557). Grey curve shows an empirical function by Martikainen (1985) for reference. (b) Global distribution of fN2Onit estimated using the regression curve and soil pH map (S1 Fig).

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Fig 8.

Simulated distribution of N2O emission using VISIT model with the pH-based fN2Onit parameterization.

(a) Global map for the 2000s and (b) frequency distribution of N2O emission intensity; note the log scale of y-axis.

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Fig 9.

Time-series of total soil N2O emissions estimated using VISIT model with the pH-based fN2Onit parameterization.

Observed global mean growth rate of atmospheric N2O by the World Data Center for Greenhouse Gases (https://ds.data.jma.go.jp/gmd/wdcgg/wdcgg.html) are shown for reference.

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Fig 10.

Relationships in the simulated global nitrogen budget by VISIT model with the pH-based parameterization of fN2Onit.

(a) Total N2O emission related to nitrogen input by biological fixation, atmospheric deposition, and fertilizer. Orange dashed line shows liner regression: N2O emission = 0.0175 N-input + 5.94 (R2 = 0.804). (b) Relationship between nitrification- and denitrification-associated N2O emission: N2O-denitrification = 3.57 N2O-nitrification– 2.33 (R2 = 0.794). Simulation data from 1901 to 2015 were used.

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