Fig 1.
Outline of methodology.
Fig 2.
Example of tree parsing.
Table 1.
Example of entity relations extracted from an abstract using the biological context extraction module.
Table 2.
Example of entity relations extracted by Context-assignment-based ABC model.
Fig 3.
Example of MeSH hierarchical structure of Alzheimer’s disease.
Fig 4.
Example of method to connect entity relations.
Table 3.
The results of relation extraction.
Table 4.
An example of entity relations in context-based ABC model.
Table 5.
An example of entity relations in co-occurrence-based ABC model.
Table 6.
The example of results from context-based ABC model (APOE–MAPT).
Table 7.
Verification of B entities using the context-based ABC model (APOE—MAPT).
Fig 5.
Change of precision according to biological context similarity threshold.
Table 8.
Verification of B entities from the context-assignment-based ABC model (APOE-MAPT).
Fig 6.
Comparison of Context-based, context-assignment based and co-occurrence based ABC model (APOE—MAPT).
Table 9.
Verification of B entities from context-based ABC model (FUS-TARDBP).
Table 10.
Verification of B entities from context-assignment based ABC model(FUS-TARDBP).
Table 11.
Example of context in relation APP-PSEN1.
Fig 7.
Precision, recall and F-measure of Context-based ABC model (APOE–MAPT).