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Table 1.

Gene ontology terms that were significantly enriched in differentially expressed genes.

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Table 1 Expand

Table 2.

Kyoto Encyclopaedia of Genes and Genomes pathways that were significantly enriched in the differentially expressed genes.

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Table 2 Expand

Fig 1.

Clustering dendrogram of genes.

Clustering dendrogram of genes, with dissimilarity based on topological overlap, together with assigned module colours.

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Fig 1 Expand

Fig 2.

Heat map of genes.

The heat map depicts the Topological Overlap Matrix among genes in the analysis. Genes in modules such as Green and Turquoise with high overlap are shown in dark red.

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Fig 2 Expand

Fig 3.

Module−trait relationships.

Genes in the Green module showed a closer relationship with BCLC staging than other gene modules and were also correlated with overall survival.

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Fig 3 Expand

Table 3.

Gene ontology terms that were significantly enriched in hub genes.

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Table 3 Expand

Table 4.

Expression level of hub genes in each tumour stage and effect of gene expression level on HCC patients’ survival.

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Table 4 Expand