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Fig 1.

Drainage basins in: (a) Levant (b) Iran (the Maharlu basin lies between the Rud-e Kor and the Gulf basins).

Drawing of Fig 1(b) reprinted from [9] under a CC BY license, with permission from author with modifications.

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Fig 1 Expand

Table 1.

Material used in this study.

Accession numbers of COI sequences are written in bold and those of LSU sequences are written in italics.

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Table 1 Expand

Fig 2.

Condensed cladogram obtained from COI sequences using Maximum Parsimony/Bayesian analysis.

Numbers above branches refer to bootstrap/posterior probability percentages; only values ≥ 50% are shown. “-” indicates that no bootstrap value was obtained from MP analysis as only a single sequence was included in the analysis.

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Fig 2 Expand

Fig 3.

Haplotype network for the Capoeta caelestis, Capoeta damascina, and C. umbla COI sequences showing the number of nucleotide differences between haplotypes.

Clades labeled A and B correspond to clades A and B in the phylogenetic tree.

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Fig 3 Expand

Fig 4.

Haplotype network for the Capoeta buhsei, Capoeta coadi, and Capoeta saadii COI sequences.

Clades labeled C, D, and E correspond to clades C, D, and E in the phylogenetic tree. These clades are not linked to clades A and B as the number of nucleotide differences exceeds the chosen connection limit (10 mutation steps).

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Fig 4 Expand

Fig 5.

Condensed cladogram obtained from LSU sequences using Maximum Parsimony/Bayesian analysis.

Numbers above branches refer to bootstrap/posterior probability percentages; only values ≥ 50% are shown. “-” indicates that no bootstrap value was obtained from MP analysis as only a single sequence was included in the analysis.

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Fig 5 Expand

Fig 6.

Condensed cladogram obtained from COI+LSU sequences using Maximum Parsimony/Bayesian analysis.

Numbers above branches refer to bootstrap/posterior probability percentages; only values ≥ 50% are shown. “-” indicates that no bootstrap value was obtained from MP analysis as only a single sequence was included in the analysis.

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Fig 6 Expand

Fig 7.

A plausible biogeographical scenario for the separation between the (a) eastern and (b) western lineages.

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Fig 7 Expand