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Fig 1.

The VLF-MRI coil system.

The main compensated solenoid with Gz gradient coils (left) and the RF coils placed inside the magnet bore (right).

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Fig 2.

MEG channel consisting of a superconducting II order gradiometer coupled to a dc SQUID.

Both the superconducting connections and the SQUID are placed inside superconducting shields. The MEG channel is mounted on the same probe supporting the superconducting detector described in [20].

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Fig 3.

Spin echo recordings (TE = 19 ms, TR = 500, NEX = 10): (A) system noise before and after the improvements done in the integration of the MRI system with the MSR; (B) an echo recorded in the final configuration.

The 10-fold noise reduction provides strong evidence of the care that has to be used in integrating a VLF-MRI device with a MSR designed for MEG measurements.

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Fig 4.

Rms PSD (root mean square power spectrum density) of a MEG channel (band-pass filtered at 0.16–270 Hz and sampled at 1024 Hz, ϕ0 is flux quantum = 2.07−15 Wb) obtained when the MRI set-up (magnet and RF coils) is placed in the measurement position (blue rms PSD) and when it is placed at about 2 m from the MEG channel (pink rms PSD).

The effect of the MRI setup is limited to a 3% increase of the mean white noise. The 50 Hz peaks (and harmonics) are present in both conditions and are not modulated by the MRI setup in the measurement position.

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Fig 5.

2D phantom projection (spin echo, TE = 19 ms, TR = 500 ms, NEX = 1, no slice selection) with 3x3 mm2 resolution: (A) Cartesian (Tacq = 16 s) and (B) polar sampling (Tacq = 8 s).

Cartesian sampling provides lower SNR but less blurring artifacts.

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Fig 6.

2D phantom projection with 1x1mm2 resolution (spin echo, TE = 19 ms, TR = 500 ms, NEX = 500, no slice selection, Tacq = 2.2 h) of the linearity phantom (a) and a picture of it (b).

There is no evidence of spatial distortions due to concomitant gradient effects.

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Fig 7.

Slices from a 323 3D phantom acquisition at 3x3x3 mm3 spatial resolution (spin echo, TE = 19 ms, TR = 500 ms, 32x32 phase encoding steps): (a) NEX = 1 for Tacq = 8.5 min and (b) NEX = 9 for Tacq = 77 min.

The geometry of the phantom can be clearly detected through 3D VLF-MRI.

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Fig 8.

Behaviour of the SNR as a function of NEX.

Same acquisition as in Fig 7: the same slice at different NEX values (a) and the corresponding measured SNR (b), together with the related fit (dotted line).

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Fig 9.

The same slice from a 643 3D phantom acquisition at 1x1x1 mm3 spatial resolution (spin echo, TE = 19 ms, TR = 500 ms, 32x32 phase encoding steps with zero filling to get a 643 matrix data, Tacq = 8.5 min for NEX = 1) at (a) different NEX values and (b) the corresponding SNR together with the related fit (dotted line).

Although a longer acquisition time is needed, images with a resolution of 1 mm3 can be recorded with the VLF-MRI system.

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Fig 10.

Slices from ex-vivo rabbit brain acquisition at 3x3x3 mm3 spatial resolution.

The slices compare (a) VLF-MRI (spin echo, TR = 500 ms, 32x32 phase encoding gradients, NEX = 16, Tacq = 2.3 h) and (b) HF-MRI 3D T1-TFE (Ultrafast Gradient Echo) standard clinical sequence for brain anatomical characterization with 1x1x1 mm3 resolution, 12x12x18 cm3 FOV, TR = 8.5 ms, TE = 3.9 ms, NEX = 3 and Tacq = 367 sec. The high field images are down sampled to match the low field resolution and spatially co-recorded. (c) The full 3D co-recorded volumes are shown with pink (VLF) and gold (HF) colors. Despite the lower resolution, VLF-MRI can be co-registered to the related HF-MRI.

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Fig 11.

Slices from a second ex-vivo rabbit brain acquisition at 3x3x3 mm3 spatial resolution.

The slices compare (a) VLF-MRI (spin echo, TR = 300 ms, 32x32 phase encoding gradients, NEX = 9, Tacq = 46 min) and (b) HF-MRI 3D T1-TFE as in Fig 10. Two homologous VLF slices of the two rabbit heads, the second slice from the top in Fig 10A (TR = 500 ms) and the sixth slice from the left in Fig 11A (TR = 300 ms, with a red frame), are selected. The selected slices and the related gradient images are shown in (c) and (d). The image with shorter TR highlights a larger number of edges inside the rabbit brain than the one with longer TR i.e. the increased tissue contrast helps in delineating structures inside the rabbit head.

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