Fig 1.
The structure of the mitochondrial genome of Delia antiqua.
The color-filled blocks indicate tRNAs, while the un-filled white blocks denote protein-coding genes, rRNA and control regions. The protein-coding genes, rRNA and control regions with black name are located on majority strand, whereas those with red names are on minority strand.
Table 1.
Organization of the Delia antiqua mitochondrial genome.
Table 2.
Nucleotide composition of the Delia antiqua mitochondrial genome.
Fig 2.
AT% vs AT-Skew and GC% vs GC-Skew in Diptera mitochondrial genomes.
Measured in bp percentage (Y-axis) and level of nucleotide skew (X-axis). Values are calculated on full length mitochondrial genomes. Orange circle, Diptera; red circle, Muscomorpha; yellow circle, Tipulomorpha; Green circle, Culicomorpha; blue circle, Tabanomorpha; black circle, Delia antiqua (Anthomyiidae).
Table 3.
Base composition and strand bias across mitochondrial genomes of Dipteran families.
Table 4.
The percentage of amino acid for Delia antiqua mitochondrial genome.
Table 5.
Relative synonymous codon usage (RSCU) in the Delia antiqua mitochondrial genome.
Fig 3.
Inferred secondary structure of tRNAs in the Delia antiqua mitochondrial genome.
The tRNAs are labeled with their corresponding amino acids.
Fig 4.
Phylogenetic tree of Diptera mitochondrial genome sequences inferred by Maximum Likelihood analysis.
Numbers above branches and with blue color indicate likelihood bootstrap values, and the numbers below branches indicate the branch length. The names of family and superfamily (in bracket) are just after the species names.
Fig 5.
Phylogenetic tree of Diptera mitochondrial genome sequences inferred by Bayesian analysis.
Numbers above branches and with blue color indicate likelihood bootstrap values, and the numbers below branches indicate the branch length. The names of family and superfamily (in bracket) are just after the species names.