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Fig 1.

Shinjuku city.

Note: Location of Shinjuku city and daytime population density per square kilometer. Note: segments in the city map are the 152 census tracts. Data source: 2005 Japanese Census, the Statistics Bureau, Ministry of Internal Affairs of Japan.

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Table 1.

The demographic and urban environmental variables of census tracts.

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Table 2.

Demographic and genotyping features of enrolled culture-positive tuberculosis patients registered at the Shinjuku Public Health Center, Tokyo, 2003–2011.

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Table 3.

Global autocorrelation analysis using Moran’s I statistics by residential and genotype cluster statuses.

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Fig 2.

Inverse Distance Weighted interpolated map with annual number of all tuberculosis patients per square kilometer.

Note: the color scale indicates the annual number of tuberculosis patients per square kilometer.

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Fig 3.

Inverse Distance Weighted interpolated maps with annual number of tuberculosis patients per square kilometer, stratified by residential status and genotype cluster status.

Note: (A) General inhabitants. (B) Genotype-clustered general inhabitants. (C) Genotype non-clustered general inhabitants. (D) Foreign-born people. (E) Genotype-clustered foreign-born people. (F) Genotype non-clustered foreign-born people. (G) Homeless people. (H) Genotype-clustered homeless people. (I) Genotype non-clustered homeless people. Note: the color scale indicates the annual number of tuberculosis patients per square kilometer.

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Fig 4.

Hotspots and coldspots for all tuberculosis patients detected by Getis-Ords Gi*.

Note: Three confidence levels (90%, 95%, and 99%) are provided; higher confidence levels imply stronger aggregation in either hotspots or coldspots.

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Table 4.

Comparison of characteristics of tuberculosis patients within hotspots and outside of hotspots of all study population including both genotype clustered and genotype non-clustered.

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Table 5.

Comparison of urban environmental factors in hotspot and coldspot census tracts for all tuberculosis patients.

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Fig 5.

Hotspots and coldspots for tuberculosis patients detected by Getis-Ords Gi*, stratified by residential statuses and genotype-cluster status.

(A) General inhabitants. (B) Genotype clustered general inhabitants. (C) Genotype non-clustered general inhabitants. (D) Foreign-born people. (E) Homeless people. (F) Genotype clustered homeless people. (G) Genotype non-clustered homeless people. Note: Three confidence levels (90%, 95%, and 99%) are provided; higher confidence levels imply stronger aggregation in either hotspots or coldspots.

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