Table 1.
The 19 significantly enriched pathways identified by Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis (p-value <0.05; q-value <0.05).
Table 2.
Differentially expressed proteins identified in CLas-infected ‘Sanhu’ red tangerine roots.
Fig 1.
Mapman analysis for differentailly expressed genes (A) and diferentially expressed proteins (B) involved in metabolic pathways.
Red squares represent genes or proteins that were significantly up-regulated; green squares represent genes or proteins that were significantly down-regulated.
Table 3.
PageMan display of CLas-modulated pathways identified by RNA-seq.
Fig 2.
Mapman analysis for differentailly expressed genes (A) and diferentially expressed proteins (B) involved in stress response.
Red squares represent genes or proteins that were significantly up-regulated; green squares represent genes or proteins that were significantly down-regulated.
Table 4.
Comparison of CLas-regulated pathways in citrus leaves, fruits, stems and roots.
Fig 3.
Mapman analysis for differentailly expressed genes (A) and diferentially expressed proteins (B) involved in ubiquitin-dependent protein degradation.
Red squares represent genes or proteins that were significantly up-regulated; green squares represent genes or proteins that were significantly down-regulated.
Fig 4.
Mapman analysis for differentailly expressed genes (A) and diferentially expressed proteins (B) involved in transportation.
Red squares represent genes or proteins that were significantly up-regulated; green squares represent genes or proteins that were significantly down-regulated.
Fig 5.
Expression of 16 differentially expressed genes at 20 dpi (A) and 50 dpi (B) as determined by quantitative real time PCR.
C indicates the expression level determined by RNA-seq. RIN4: RPM1 interacting protein 4; RPS2: disease resistant protein ribosomal protein S2; NPR1: regulatory protein nonexpresser of PR genes 1; DRP: disease resistant protein (TIR-NBS-LRR class); PP2-B15: Phloem protein 2-B15; BAM: β-amylase; PMEI: pectin methylesterase inhibitor; TPP: trehalose-6-phosphate phosphatase; XTR6: Xyloglucan endotransglycosylase 6; BZIP: bZIP transcription factor; CRPK: cysteine-rich protein kinase; ACR4: Act repeat 4; BRI1: BRI1 kinase inhibitor 1; KCS6: 3-ketoacyl-CoA synthase 6.