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Figure 1.

Flow chart showing patients excluded from analysis.

Of the 20 excluded patients, 17 were initiated on TDF-based first-line therapy, dual NRTI therapy or were already receiving a second-line regimen at time of genotype. The three protocol violations were: two patients on treatment for less than a year, and one with viral load <1000 copies/ml at the time of genotyping.

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Figure 1 Expand

Table 1.

Demographic and clinical characteristics.

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Figure 2.

NNRTI mutations.

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Figure 3.

NRTI mutations, including summary of proportion with thymidine analogue mutations (TAMs).

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Table 2.

Univariate analysis of factors associated with compromised standard second-line regimen (genotypic susceptibility score <2).

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Table 2 Expand

Table 3.

Summary of acquired drug resistance studies in adults treated with first-line antiretroviral therapy in South Africa.

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