Table 1.
Genetic variation within HLA-C 3′ UTR sequences of the HLA-C alleles observed in the Black South African population group.
Table 2.
Genetic variation within HLA-C 3′ UTR sequences of the HLA-C alleles observed in the Caucasian South African population group.
Table 3.
Linkage disequilibrium between the 263 indel and the HLA-C alleles present in the Black and Caucasian South African population groups.
Figure 1.
The haplotypes identified within the HLA-C 3′ UTR.
The positions involved in the two haplotypes identified are indicated in colour. The haplotype encompassing the 263 indel is shown in pink, while the haplotype encompassing the 230 indel is shown in blue. The major and minor alleles at each position are also indicated. Positions were only included in the haplotypes if both D' and r2 measures of pairwise LD were equal to 1. Polymorphic positions are indicated by their position relative to the start of the HLA-C 3′ UTR.
Table 4.
Linkage disequilibrium between the -35 SNP and the HLA-C alleles present in the Black and Caucasian South African population groups.