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Figure 1.

Anatomical regions delineated over the T1 images.

Cerebellar hemispheres (CeH), mesencephalon (Me), vermis (Ve), pons (Po); subcortical white matter (Sc WM), hippocampus (Hc), entorhinal cortex (ECx), temporal cortex (TCx), occipital cortex (OcCx); piriform cortex (PiCx), parietal cortex (PaCx), cingulate cortex (CgCx), fimbria of hippocampus (FH), fornix (Fx), thalamus (Th), hypothalamus (Ht), amygdala (Am); external capsule (EC), internal capsule (IC), claustrum (Cl), lenticular nucleus (LN), caudate nucleus (CN), corona radiata (CR), corpus callosum (CC), septum (Spt), forebrain (Fb), basal forebrain (BF); frontal cortex (Fcx), insular cortex (Icx), anterior commissure (AC); medial frontal cortex (MFCx), periventricular white matter (PvWM).

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Figure 1 Expand

Figure 2.

3D reconstruction of the brain regions of the rabbit.

From left to right: cortical regions, white matter regions, deep gray matter, other regions. From top to bottom: dorsal view; anterior view; lateral view; ventral view; posterior view; and oblique view.

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Figure 3.

Brain regions overlapped over representative slices of the T1-weighted image.

First row: cortical regions; second and third rows: white matter regions; fourth row: deep gray matter and fifth row: other regions.

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Table 1.

Brain region characterization.

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Figure 4.

Individual atlases.

Each row corresponds to one subject.

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Figure 5.

Representative slices of the average template.

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Figure 6.

Representative slices of the probabilistic region maps over the template.

Color intensity represents the probability value.

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Figure 7.

Representative slices of the automatic segmentation of a brain volume.

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Table 2.

Accuracy of the automatic atlas-based segmentation.

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Figure 8.

Confusion matrix.

Comparison between the automatic segmentation and the manual delineation.

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