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Figure 1.

1) The P72 template MD image.

2) The P72 hippocampus (red), fimbria (pink), and fornix (purple) visualized as a 3D mesh. 3) The P72 caudate (blue), external capsule (green), genu (pink), and ac (yellow) in the MD.

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Figure 1 Expand

Figure 2.

1) The P72 body of the corpus callosum (orange), genu (dark pink), and splenium (yellow), with the external capsule (green), caudate (light blue), lateral ventricles (dark blue), fimbria (light pink), and hippocampus (red) in the MD.

2) The P72 rest of forebrain (light green) and the rest of midbrain (dark green) with the ac (yellow), internal capsule (pink), thalamus (brown), and central gray (tan) in the MD.

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Figure 2 Expand

Figure 3.

1) The P72 ventricle system before segmentation in the MD.

2) The P72 ventricle system after segmentation in the MD.

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Figure 3 Expand

Figure 4.

1) The P72 thalamus (brown), ac (yellow), hypothalamus (teal), VTA (navy), central gray (tan), superior (teal) and inferior (purple) colliculi, cerebellum (green), aqueduct, 3rd, and 4th ventricle (blue), genu (pink), body of the corpus callosum (orange), splenium (gold), and brain stem (green) in the MD.

2) The P72 neocortex (blue), with the external capsule (green), ac (yellow), and olfactory bulb (pink) in the MD.

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Figure 4 Expand

Figure 5.

1) 2) The P72 fimbria (pink), fornix (purple), and 3rd ventricle (blue) in a 3D mesh.

2) The P72 internal capsule (pink) and amygdala (red), with the external capsule (green), body of the corpus callosum (orange), 3rd ventricle (blue), caudate (light blue), thalamus (brown), and hypothalamus (teal) in the MD.

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Figure 5 Expand

Figure 6.

1) The P72 substantia nigra (orange) and VTA (navy) with the external capsule (light green), body of the corpus callosum (light orange), hippocampus (red), ventricles (blue), rest of midbrain (dark green), VTA (navy), and hypothalamus (teal) in the MD.

2) The P72 cerebellum (green), superior (teal) and inferior (purple) colliculi, and centrally gray (tan) in a 3D mesh.

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Figure 6 Expand

Figure 7.

1) The P14 template MD image.

2) The P14 medial forebrain bundle (teal) and globus pallidus (lime green), with the caudate (light blue), lateral ventricles (dark blue), external capsule (light green), cingulum (dark green), and ac (yellow) in the MD.

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Figure 7 Expand

Figure 8.

1) The P14 piriform in the MD.

2) The P14 red nucleus (red) with the superior (teal and green) and inferior (purple) colliculi, and central gray (tan) in the MD.

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Figure 8 Expand

Figure 9.

1) The P14 cortex divisions in the MD.

2) The P14 cortex divisions in the MD with the central gray (tan). The crosshairs allow the reader to see the dorsal (light) and ventral (dark) divisions as well as the lateral division.

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Figure 9 Expand

Figure 10.

1) The P5 template MD image.

2) The P5 cerebral peduncle (pink) with the hippocampus (red) and the thalamus (brown) in the MD.

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Figure 10 Expand

Figure 11.

1) The P5 fornix (purple) and columna fornicis (red), with the pons (pink), brainstem (green), and ventricle (blue) in the MD.

2) The P5 nucleus accumbens (brown) with the caudate (blue) and the ac (yellow) in the MD. 3) The P5 islands of calleja (green) with the caudate (blue) and ac (yellow) in the MD.

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