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Table 1.

Phenotypic and genetic characteristics of S. hominis subspecies.

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Table 2.

Identification of a candidate novobiocin resistance mutation in gyrB.

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Table 3.

Genetic variation detected by the S. hominis MLST scheme.

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Table 3 Expand

Figure 1.

Phylogeny of CcrA4 (panel A) and CcrB4 (panel B) alleles.

Translated sequences of ccrAB are from the eight S. hominis sequences obtained here (SH, underlined), along with various S. hominis (SH) and S. aureus (SA) reference sequences. Circles outline the major CcrAB alleles. Allelic variant and strain name (and GenBank accession number) are as follows: SH1 = GIFU12263 (AB063171); SH2 = DAR4404 (JQ836542); SH3 = DAR4401 (JQ836541); SH4 = DAR4386 (JQ836536), DAR4388 (JQ836537), DAR4394 (JQ836540), DAR4405 (JQ836543); SH5 = DAR4392 (JQ836539); SH6 = DAR4391 (JQ836538); SA1 = 85-2082 (AB037671); SA2 = N315 (NC_002745); SA3 = HDE288 (AF411935); SA4 = CHE482 (EF126185); SA5 = CHE482 (EF126186).

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Figure 1 Expand

Figure 2.

Phylogeny of sequence types (STs) based on neighbor-net (panel A) and ClonalFrame (panel B) algorithms.

Numbers at nodes on the ClonalFrame tree are posterior probabilities >50/100. Highlighting indicates the three S. hominis subsp. novobiosepticus STs.

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Figure 2 Expand