Table 1.
Summary of DNA partitions.
Figure 1.
Maximum likelihood phylogenetic tree of the Arid clade of the genus Hemidactylus.
Individuals of one species are collapsed into one terminal branch. Black dots on the nodes and on the terminal lineages indicate ML bootstrap values ≥70 and BI posterior probabilities ≥0.95. Species are coloured according to their geographic origin marked on the inset map where the sampling is also depicted. Colours and abbreviations in the nodes indicate reconstruction of ancestral distribution. The probability of the ancestral area reconstruction of the node marked with * is: Afr 19%, Afr/Arb 33.3%, Afr/Arb/Lev 19%, Afr/Arb/Irn 19%, Afr/Arb/Lev/Irn 9.5%; of the node **: Arb 80.5%, Afr/Arb 19.5%; of the node ***: Afr/Arb 33.3%, Afr/Soc 33.3%, Afr/Arb/Soc 33.3%; for all other nodes 100% for the area depicted. Undescribed species are labelled in accordance with previous works [7.23].
Figure 2.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: African subclade.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 3.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: Socotran subclade.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 4.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: The Persian Gulf.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 5.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: The Gulf of Aden.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 6.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: The Levant.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 7.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: Hadhramaut and Dhofar.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 8.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: H.
robustus and related species. Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 9.
Detail of the phylogenetic tree of the Arid clade Hemidactylus: Oman and Socotra Archipelago.
Red dots in the nodes indicate ML bootstrap values ≥70 and BI pp≥0.95. Numbers after species names refer to sample codes; numbers on the right correspond with the localities numbers in the map. Ages of the nodes estimated with BEAST dating analysis are indicated by the nodes, mean above in bold, 95% HPD interval in plain below.
Figure 10.
Summary of historical dispersal events of Hemidactylus geckos from Arabia.
Dates by arrows indicate mean time estimates of the events. In situ radiation of some lineages following their dispersal is indicated as a radiation of arrows.