Figure 1.
Length-wise distribution of peptides (B-cell epitopes and non-epitopes), we divided peptides in different bins like peptides having a length less than five residues, having residues between 5 to 10 residues.
Figure 2.
Two-sample logo showing dominance of surface accessible residues in B-cell epitopes.
Yellow and black color residues indicate to surface accessible and non-accessible residues respectively.
Table 1.
The performance of SVM models developed on Lbtope_Fixed dataset using various features.
Table 2.
The performance of IBk models developed on Lbtope_Fixed dataset using various features.
Table 3.
The performance of SVM models developed on Lbtope_Variable dataset using various features.
Table 4.
The performance of IBk models developed on Lbtope_Variable dataset using various features.
Table 5.
The performance of SVM models developed on Lbtope_Confirm (epitope tested by at least two studies) dataset using various features.
Table 6.
The performance of IBk models developed on Lbtope_Confirm (epitope tested by at least two studies) dataset using various features.
Table 7.
The performance of SVM models developed on Lbtope_Fixed_non_redundant dataset using various features.
Table 8.
The performance of SVM models developed on Lbtope_Variable_non_redundant dataset using various features.
Table 9.
The performance of our method LBtope on ABCpred dataset and performance of ABCpred on dataset Lbtope_Fixed (fixed length patterns used in this study).
Table 10.
The performance of BCPred, Chen on Lbtope_fixed and, Lbtope_variable dataset and performance of LBtope models on datasets used in previous studies.