Figure 1.
The overall architecture of AutoPat.
Table 1.
The pattern templates used for pattern generation.
Table 2.
Top 5 unsupervised patterns and examples of seed patterns of regulation relationships.
Figure 2.
Example of combined weight of extracted sentences.
Figure 3.
The frequency distribution of unsupervised patterns.
Figure 4.
The extraction precision of different thresholds.
Figure 5.
The precision of the Top N ranking results for unsupervised patterns.
Figure 6.
Examples of the homonym and abbreviation issues.
Table 3.
The performance comparison with Textpresso.
Table 4.
Top-K Precision of AutoPat.
Table 5.
The overall performance comparison.
Table 6.
The list of extraction results of HIF-1 TF pathway in PID.
Figure 7.
The global network of HIF-1 TF.
Figure 8.
The example of an indirect relationship between HIF-1 and p53.
Table 7.
The high frequency of TF-TG relationships in HIF-1 global network.